RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 CASP6P55212 293 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 C3orf33Q6P1S2 294 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 USP51Q70EK9 711 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 H1FNTQ75WM6 255 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-201ENST00000350148 VASH1Q7L8A9 365 aaPredicted RBP11.16□□□□□ -0.62
SMAD9-201ENST00000350148 RBM45Q8IUH3 476 aaKnown RBP11.16□□□□□ -0.62
SMAD9-201ENST00000350148 ACBD4Q8NC06 268 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 OR14K1Q8NGZ2 314 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 SNAPC3Q92966 411 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 ALG12Q9BV10 488 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF69Q9UC07 566 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 SCP2D1Q9UJQ7 156 aa11.16□□□□□ -0.62
SMAD9-201ENST00000350148 KLRC4-KLRK1H3BQV0 150 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 FCMRO60667 390 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 PTTG1O95997 202 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 AQP2P41181 271 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 SELENOVP59797 346 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 GALK2Q01415 458 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 PRTGQ2VWP7 1150 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 TP53I3Q53FA7 332 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 RHBDD2Q6NTF9 364 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 UBE3DQ7Z6J8 389 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 FRMD1Q8N878 549 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 OR52I1Q8NGK6 324 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 TSLPQ969D9 159 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 MRGPRX4Q96LA9 322 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 RBM38Q9H0Z9 239 aaKnown RBP11.15□□□□□ -0.62
SMAD9-201ENST00000350148 CHST8Q9H2A9 424 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF768Q9H5H4 540 aaKnown RBP11.15□□□□□ -0.62
SMAD9-201ENST00000350148 NUDT15Q9NV35 164 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 UGT2A1Q9Y4X1 527 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 CIB4A0PJX0 185 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 TVP23AA6NH52 213 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 MEN1O00255 615 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 GPR171O14626 319 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 ANXA3P12429 323 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 CYB561P49447 251 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 SLC14A1Q13336 389 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 SMN1Q16637 294 aaKnown RBP11.15□□□□□ -0.62
SMAD9-201ENST00000350148 VWA2Q5GFL6 755 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 SMIM15Q7Z3B0 74 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 TMPRSS12Q86WS5 348 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 UBQLNLQ8IYU4 475 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 FAM46BQ96A09 425 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 C4orf36Q96KX1 117 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF587Q96SQ5 575 aaPredicted RBP11.15□□□□□ -0.62
SMAD9-201ENST00000350148 HHLA2Q9UM44 414 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF281Q9Y2X9 895 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 MRPS2Q9Y399 296 aaKnown RBP11.15□□□□□ -0.62
SMAD9-201ENST00000350148 IGHV5-51A0A0C4DH38 117 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 TMEM212A6NML5 194 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 POU3F3P20264 500 aaPredicted RBP11.15□□□□□ -0.62
SMAD9-201ENST00000350148 TGFBR1P36897 503 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 RGS19P49795 217 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 SELENBP1Q13228 472 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 OGFOD3Q6PK18 319 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 TSSK4Q6SA08 328 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 C3P1Q6ZMU1 363 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 ZNF782Q6ZMW2 699 aaPredicted RBP11.15□□□□□ -0.62
SMAD9-201ENST00000350148 OR1L3Q8NH93 324 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 CTRCQ99895 268 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 ARHGAP9Q9BRR9 750 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 EXOSC3Q9NQT5 275 aaKnown RBP11.15□□□□□ -0.62
SMAD9-201ENST00000350148 RBM7Q9Y580 266 aaKnown RBP11.15□□□□□ -0.62
SMAD9-201ENST00000350148 PRAMEF4O60810 478 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 DDAH2O95865 285 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 SBK2P0C263 348 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 POU3F1Q03052 451 aaPredicted RBP11.15□□□□□ -0.62
SMAD9-201ENST00000350148 ACSM3Q53FZ2 586 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 PAN3Q58A45 887 aaKnown RBP11.15□□□□□ -0.62
SMAD9-201ENST00000350148 TMEM201Q5SNT2 666 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 PRAMEF9Q5VWM5 478 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 Q6ZPB1 254 aaPredicted RBP11.15□□□□□ -0.62
SMAD9-201ENST00000350148 PLPP5Q8NEB5 264 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 TMEM43Q9BTV4 400 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 CHRNA9Q9UGM1 479 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 MEMO1Q9Y316 297 aa11.15□□□□□ -0.62
SMAD9-201ENST00000350148 RBBP9O75884 186 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 CBX5P45973 191 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 RNF4P78317 190 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF141Q15928 474 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 PXDC1Q5TGL8 231 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 FCRLBQ6BAA4 426 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 SLC16A9Q7RTY1 509 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 RELTQ969Z4 430 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 TM4SF19Q96DZ7 209 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 EDEM2Q9BV94 578 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 NIT2Q9NQR4 276 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 LOC100509620A0A075B734 347 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 SYT7O43581 403 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 NKX6-1P78426 367 aaPredicted RBP11.14□□□□□ -0.63
SMAD9-201ENST00000350148 TMEM69Q5SWH9 247 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 CFAP77Q6ZQR2 320 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 NANOGP1Q8N7R0 232 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 OR51E2Q9H255 320 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 SCN5AQ14524 2016 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 PIGBOS1A0A0B4J2F0 54 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 TRDV1A0A1B0GX56 115 aa11.14□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF705FA8MVS1 300 aaPredicted RBP11.14□□□□□ -0.63
SMAD9-201ENST00000350148 ZNF705DP0CH99 300 aaPredicted RBP11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms