RNA–Protein interactions for RNA: ENST00000348225.6

PTN-201, Transcript of pleiotrophin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTN, Length 1,614 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTN-201ENST00000348225 B4GALT7Q9UBV7 327 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 MOKQ9UQ07 419 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 CEP250Q9BV73 2442 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 A0A1W2PNR3 127 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 MS4A18H0YCH9 400 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 ARHGEF9O43307 516 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 GLCEO94923 617 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 AKR7A3O95154 331 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 PMS2P2O95744 297 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 SCG5P05408 212 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 LIMS3P0CW19 117 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 LIMS4P0CW20 117 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 GDF1P27539 372 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 TGFBR2P37173 567 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 SH3BGRP55822 239 aaPredicted RBP16.78■□□□□ 0.28
PTN-201ENST00000348225 RAC1P63000 192 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 SLC35A1P78382 337 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 CDC20Q12834 499 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 MS4A18Q3C1V0 323 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 FAM205BPQ63HN1 556 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 PAQR6Q6TCH4 344 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 GHDCQ8N2G8 530 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 OR2T4Q8NH00 348 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 ZNF519Q8TB69 540 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 ZPLD1Q8TCW7 415 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 KCNE4Q8WWG9 221 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 MIB2Q96AX9 1013 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 CNN2Q99439 309 aaKnown RBP16.78■□□□□ 0.28
PTN-201ENST00000348225 TSC22D3Q99576 134 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 OR2B2Q9GZK3 357 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 ADGRL4Q9HBW9 690 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 ERVK13-1Q9NX77 482 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 KLF13Q9Y2Y9 288 aaPredicted RBP16.78■□□□□ 0.28
PTN-201ENST00000348225 PCDHGB7Q9Y5F8 929 aa16.78■□□□□ 0.28
PTN-201ENST00000348225 DCDC2BA2VCK2 349 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 A6NIZ1 184 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 C12orf71A8MTZ7 269 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 NPIPA5E9PKD4 350 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 SULT2B1O00204 365 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 CCRL2O00421 344 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 SEC14L5O43304 696 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 OPN1LWP04000 364 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 SHC1P29353 583 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 RGS6P49758 472 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 DIO1P49895 249 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 RAP1BP61224 184 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 RAP1AP62834 184 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 FOXO1Q12778 655 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 MLLT11Q13015 90 aaPredicted RBP16.77■□□□□ 0.27
PTN-201ENST00000348225 TSTQ16762 297 aaKnown RBP16.77■□□□□ 0.27
PTN-201ENST00000348225 SLC16A12Q6ZSM3 486 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 TMPPEQ6ZT21 453 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 PXKQ7Z7A4 578 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 LHFPL3Q86UP9 236 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 OR10H4Q8NGA5 316 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 OR52N1Q8NH53 320 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 SMPDL3BQ92485 455 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 ZMYND19Q96E35 227 aaPredicted RBP16.77■□□□□ 0.27
PTN-201ENST00000348225 ISYNA1Q9NPH2 558 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 NPIPA1Q9UND3 350 aa16.77■□□□□ 0.27
PTN-201ENST00000348225 FREM2Q5SZK8 3169 aa16.76■□□□□ 0.27
PTN-201ENST00000348225 DAPL1A0PJW8 107 aa16.76■□□□□ 0.27
PTN-201ENST00000348225 PINLYPA6NC86 204 aa16.76■□□□□ 0.27
PTN-201ENST00000348225 TRAPPC6AO75865 159 aa16.76■□□□□ 0.27
PTN-201ENST00000348225 MRPL3P09001 348 aaKnown RBP16.76■□□□□ 0.27
PTN-201ENST00000348225 CD46P15529 392 aa16.76■□□□□ 0.27
PTN-201ENST00000348225 WT1P19544 449 aaPredicted RBP16.76■□□□□ 0.27
PTN-201ENST00000348225 ZNF239Q16600 458 aaKnown RBP16.76■□□□□ 0.27
PTN-201ENST00000348225 TMPRSS11AQ6ZMR5 421 aa16.76■□□□□ 0.27
PTN-201ENST00000348225 YRDCQ86U90 279 aaKnown RBP16.76■□□□□ 0.27
PTN-201ENST00000348225 ERI1Q8IV48 349 aaKnown RBP16.76■□□□□ 0.27
PTN-201ENST00000348225 EXD3Q8N9H8 876 aa16.76■□□□□ 0.27
PTN-201ENST00000348225 MDS2Q8NDY4 140 aa16.76■□□□□ 0.27
PTN-201ENST00000348225 FAM83FQ8NEG4 500 aaPredicted RBP16.76■□□□□ 0.27
PTN-201ENST00000348225 OR51L1Q8NGJ5 315 aa16.76■□□□□ 0.27
PTN-201ENST00000348225 OR6K6Q8NGW6 343 aa16.76■□□□□ 0.27
PTN-201ENST00000348225 OPALINQ96PE5 141 aa16.76■□□□□ 0.27
PTN-201ENST00000348225 NOX1Q9Y5S8 564 aa16.76■□□□□ 0.27
PTN-201ENST00000348225 PRSS37A4D1T9 235 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 NME2P1O60361 137 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 BCL10O95999 233 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 SP1P08047 785 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 RFPL3SP0C7P2 107 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 NME2P22392 152 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 B3GALT5-AS1P59052 145 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 CSNK2A1P68400 391 aaPredicted RBP16.75■□□□□ 0.27
PTN-201ENST00000348225 ARG2P78540 354 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 HSF1Q00613 529 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 POU3F1Q03052 451 aaPredicted RBP16.75■□□□□ 0.27
PTN-201ENST00000348225 C19orf57Q0VDD7 668 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 FOXC1Q12948 553 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 OR2G6Q5TZ20 316 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 SLC25A25Q6KCM7 469 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 SULF2Q8IWU5 870 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 KDM8Q8N371 416 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 TMEM99Q8N816 258 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 KLHL15Q96M94 604 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 SFXN2Q96NB2 322 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 ALG12Q9BV10 488 aa16.75■□□□□ 0.27
PTN-201ENST00000348225 CAB39Q9Y376 341 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 66.1 ms