RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 BORCS7-ASMTA0A0B4J1R7 106 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 H7C1C5 153 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 P04436 131 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 LIMS3P0CW19 117 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 LIMS4P0CW20 117 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 LCN6P62502 163 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 IL13RA1P78552 427 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 DYRK1AQ13627 763 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 C14orf28Q4W4Y0 310 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 NKAPLQ5M9Q1 402 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 IDO2Q6ZQW0 420 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 OR1J4Q8NGS1 313 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 OR5H2Q8NGV7 314 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 RASD2Q96D21 266 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 FBXL2Q9UKC9 423 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 NXT1Q9UKK6 140 aaKnown RBP13.56□□□□□ -0.24
NUP50-201ENST00000347635 TSPAN11A1L157 253 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 GLCEO94923 617 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 CALCBP10092 127 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 TPT1P13693 172 aaKnown RBP13.56□□□□□ -0.24
NUP50-201ENST00000347635 CXADRP78310 365 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 HSD11B2P80365 405 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 TMEM225Q6GV28 225 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 TMUB2Q71RG4 321 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 BPIFB2Q8N4F0 458 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 DNAAF1Q8NEP3 725 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 SFXN2Q96NB2 322 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 DHRS9Q9BPW9 319 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 WDR76Q9H967 626 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 CUTCQ9NTM9 273 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 ATXN7L1Q9ULK2 861 aaPredicted RBP13.56□□□□□ -0.24
NUP50-201ENST00000347635 HHLA2Q9UM44 414 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 KCNE3Q9Y6H6 103 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 A0A0B4J203 849 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 FFAR1O14842 300 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 SLC16A7O60669 478 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 MFSD13AQ14CX5 517 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 TRIM61Q5EBN2 209 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 TMEM196Q5HYL7 178 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 CLVS2Q5SYC1 327 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 YOD1Q5VVQ6 348 aaPredicted RBP13.56□□□□□ -0.24
NUP50-201ENST00000347635 NDUFAF7Q7L592 441 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 CD163Q86VB7 1156 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 UPRTQ96BW1 309 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 FOXN4Q96NZ1 517 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 IL20Q9NYY1 176 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 MBD1Q9UIS9 605 aaPredicted RBP13.56□□□□□ -0.24
NUP50-201ENST00000347635 VSTM5A8MXK1 200 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 PRAMEF4O60810 478 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 CBFBQ13951 182 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 SLC25A35Q3KQZ1 300 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 C1QTNF12Q5T7M4 302 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 PRAMEF9Q5VWM5 478 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 ESPNLQ6ZVH7 1005 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 OR1E3Q8WZA6 343 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 FOXRED1Q96CU9 486 aaPredicted RBP13.56□□□□□ -0.24
NUP50-201ENST00000347635 SMIM19Q96E16 107 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 NAA11Q9BSU3 229 aaPredicted RBP13.56□□□□□ -0.24
NUP50-201ENST00000347635 SDHAF2Q9NX18 166 aa13.56□□□□□ -0.24
NUP50-201ENST00000347635 GALP22466 123 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 RPL35P42766 123 aaKnown RBP13.55□□□□□ -0.24
NUP50-201ENST00000347635 SQSTM1Q13501 440 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 AGERQ15109 404 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 TMEM184AQ6ZMB5 413 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 SLC25A44Q96H78 314 aaPredicted RBP13.55□□□□□ -0.24
NUP50-201ENST00000347635 LRFN5Q96NI6 719 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 C6orf106Q9H6K1 298 aaPredicted RBP13.55□□□□□ -0.24
NUP50-201ENST00000347635 HRASLSQ9HDD0 168 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 SPHK1Q9NYA1 384 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 DAPP1Q9UN19 280 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 KCNIP3Q9Y2W7 256 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 MICAL3Q7RTP6 2002 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 A6NIZ1 184 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 HMGB3O15347 200 aaKnown RBP13.55□□□□□ -0.24
NUP50-201ENST00000347635 TGM6O95932 706 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 SLC35E2P0CK97 266 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 RAP1BP61224 184 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 RAP1AP62834 184 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 CARD17Q5XLA6 110 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 KANSL1Q7Z3B3 1105 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 TMPRSS9Q7Z410 1059 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 SYS1Q8N2H4 156 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 ZNF578Q96N58 590 aaPredicted RBP13.55□□□□□ -0.24
NUP50-201ENST00000347635 HIST1H2AAQ96QV6 131 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 CDC6Q99741 560 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 RGCCQ9H4X1 137 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 GAREM1Q9H706 876 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 LYRM4Q9HD34 91 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 A0A1W2PPC4 97 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 IL32P24001 234 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 SPOCK1Q08629 439 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 INSL4Q14641 139 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 OR7E24Q6IFN5 339 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 SYT9Q86SS6 491 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 CMTM4Q8IZR5 234 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 ZNF511Q8NB15 262 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 PMM1Q92871 262 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 MIXL1Q9H2W2 232 aa13.55□□□□□ -0.24
NUP50-201ENST00000347635 EXOGQ9Y2C4 368 aaKnown RBP13.55□□□□□ -0.24
NUP50-201ENST00000347635 A6NCN8 305 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms