RNA–Protein interactions for RNA: ENST00000345734.7

ATG4A-202, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best) BASIC

Gene ATG4A, Length 2,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-202ENST00000345734 GALNT9Q9HCQ5 603 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 MMP25Q9NPA2 562 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 EXOSC4Q9NPD3 245 aaKnown RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 KLHL1Q9NR64 748 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 NDUFB11Q9NX14 153 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 ERVK13-1Q9NX77 482 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 YARS2Q9Y2Z4 477 aaKnown RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 SPEF1Q9Y4P9 236 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 PCDHGB2Q9Y5G2 931 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 B3GALT1Q9Y5Z6 326 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 A0A0B4J203 849 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 J3QRK9 145 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 FLRT2O43155 660 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 IFNGP01579 166 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 KLK3P07288 261 aaPredicted RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 GP1BBP13224 206 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 CPEP16870 476 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 PRKACAP17612 351 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 PGCP20142 388 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 PAICSP22234 425 aaKnown RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 RPS5P46782 204 aaKnown RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 P2RX1P51575 399 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 GFRA1P56159 465 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 EFR3AQ14156 821 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 PCOLCEQ15113 449 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 QPRTQ15274 297 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 FIP1L1Q6UN15 594 aaKnown RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 DPY19L2P2Q6ZN68 376 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 CCDC28AQ8IWP9 274 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 FAM98AQ8NCA5 519 aaKnown RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 PSD4Q8NDX1 1056 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 OR51L1Q8NGJ5 315 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 ZPLD1Q8TCW7 415 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 TMEM203Q969S6 136 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 LOXL4Q96JB6 756 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 KATNB1Q9BVA0 655 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 WDR54Q9H977 334 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 SCPEP1Q9HB40 452 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 NANSQ9NR45 359 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 C19orf25Q9UFG5 118 aaPredicted RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 PTRH2Q9Y3E5 179 aaKnown RBP8.36□□□□□ -1.07
ATG4A-202ENST00000345734 PCDHGA5Q9Y5G8 931 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 SDK2Q58EX2 2172 aa8.36□□□□□ -1.07
ATG4A-202ENST00000345734 MED12Q93074 2177 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 AHCTF1Q8WYP5 2266 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 PCNX2A6NKB5 2137 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 C12orf71A8MTZ7 269 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 CDX4O14627 284 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-202ENST00000345734 KLF7O75840 302 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-202ENST00000345734 OR2J2O76002 312 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 ZFAND5O76080 213 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 TSPAN19P0C672 248 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 ASAH2BP0C7U1 165 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 CD59P13987 128 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 CXCR1P25024 350 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 RPS25P62851 125 aaKnown RBP8.35□□□□□ -1.07
ATG4A-202ENST00000345734 COL28A1Q2UY09 1125 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 TRIM16LQ309B1 348 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 TIMM50Q3ZCQ8 353 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 CCDC58Q4VC31 144 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 SLC43A2Q8N370 569 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 KLHL36Q8N4N3 616 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 LRRC75AQ8NAA5 344 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 KBTBD8Q8NFY9 601 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 OR10H4Q8NGA5 316 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 OR5L2Q8NGL0 311 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 OR6Q1Q8NGQ2 317 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 SPRYD4Q8WW59 207 aaPredicted RBP8.35□□□□□ -1.07
ATG4A-202ENST00000345734 ZNRF4Q8WWF5 429 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 LIPHQ8WWY8 451 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 NMNAT3Q96T66 252 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 TIMP4Q99727 224 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 NPAS1Q99742 590 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 COQ7Q99807 217 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 MROQ9BYG7 248 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 RERGLQ9H628 205 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 ISG20L2Q9H9L3 353 aaKnown RBP8.35□□□□□ -1.07
ATG4A-202ENST00000345734 SIAEQ9HAT2 523 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 ADGRL4Q9HBW9 690 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 NRIP3Q9NQ35 241 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 MYOTQ9UBF9 498 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 SEC14L4Q9UDX3 406 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 STUB1Q9UNE7 303 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 TMEM72A0PK05 275 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 METTL15A6NJ78 407 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 B4E171 279 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 SERPINI2O75830 405 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 IGF2P01344 180 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 CD3EP07766 207 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 PSMA1P25786 263 aaKnown RBP8.35□□□□□ -1.07
ATG4A-202ENST00000345734 CCKBRP32239 447 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 ADMP35318 185 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 IDUAP35475 653 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 TSPAN7P41732 249 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 PRPS1P60891 318 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 PSPHP78330 225 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 OXA1LQ15070 435 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 BTBD16Q32M84 506 aa8.35□□□□□ -1.07
ATG4A-202ENST00000345734 ZNF322Q6U7Q0 402 aaPredicted RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms