RNA–Protein interactions for RNA: ENST00000345519.9

CLTA-202, Transcript of clathrin light chain A, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLTA, Length 1,073 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-202ENST00000345519 KBTBD8Q8NFY9 601 aa17.35■□□□□ 0.37
CLTA-202ENST00000345519 TMEM255BQ8WV15 326 aa17.35■□□□□ 0.37
CLTA-202ENST00000345519 GEMIN6Q8WXD5 167 aaKnown RBP17.35■□□□□ 0.37
CLTA-202ENST00000345519 BCL2L2Q92843 193 aaPredicted RBP17.35■□□□□ 0.37
CLTA-202ENST00000345519 FBXW5Q969U6 566 aa17.35■□□□□ 0.37
CLTA-202ENST00000345519 HS6ST2Q96MM7 605 aa17.35■□□□□ 0.37
CLTA-202ENST00000345519 LRRC37BQ96QE4 947 aa17.35■□□□□ 0.37
CLTA-202ENST00000345519 USF3Q68DE3 2245 aa17.35■□□□□ 0.37
CLTA-202ENST00000345519 OVOL3O00110 214 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 ABCD4O14678 606 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 HSD17B1P14061 328 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 NF1P21359 2839 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 ROR2Q01974 943 aaKnown RBP17.34■□□□□ 0.37
CLTA-202ENST00000345519 ST3GAL3Q11203 375 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 C1DQ13901 141 aaKnown RBP17.34■□□□□ 0.37
CLTA-202ENST00000345519 TBRG1Q3YBR2 411 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 C9orf135Q5VTT2 229 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 ANKRD16Q6P6B7 361 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 KLHL17Q6TDP4 642 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 PRSS57Q6UWY2 283 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 C20orf196Q8IYI0 205 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 PGAM4Q8N0Y7 254 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 TMEM239Q8WW34 195 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 TPD52L3Q96J77 140 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 KCTD14Q9BQ13 255 aaPredicted RBP17.34■□□□□ 0.37
CLTA-202ENST00000345519 GPR35Q9HC97 309 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 MOV10Q9HCE1 1003 aaKnown RBP17.34■□□□□ 0.37
CLTA-202ENST00000345519 DLL4Q9NR61 685 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 ZFHX3Q15911 3703 aa17.34■□□□□ 0.37
CLTA-202ENST00000345519 NSD1Q96L73 2696 aaPredicted RBP17.33■□□□□ 0.36
CLTA-202ENST00000345519 NPIPB13A6NJU9 1138 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 ZNF99A8MXY4 864 aaPredicted RBP17.33■□□□□ 0.36
CLTA-202ENST00000345519 NPIPB4C9JG80 1138 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 FFAR1O14842 300 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 CH25HO95992 272 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 ADORA3P0DMS8 318 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 PRPS1P60891 318 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 PGGHGQ32M88 737 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 PHYHD1Q5SRE7 291 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 SHEQ5VZ18 495 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 TSEN54Q7Z6J9 526 aaKnown RBP17.33■□□□□ 0.36
CLTA-202ENST00000345519 DTX2Q86UW9 622 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 LRRC17Q8N6Y2 441 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 ADAD1Q96M93 576 aaKnown RBP17.33■□□□□ 0.36
CLTA-202ENST00000345519 SEPHS2Q99611 448 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 GORASP2Q9H8Y8 452 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 C20orf141Q9NUB4 165 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 MED29Q9NX70 200 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 CD300AQ9UGN4 299 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 TAGLN3Q9UI15 199 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 SNX13Q9Y5W8 968 aa17.33■□□□□ 0.36
CLTA-202ENST00000345519 SLC35F4A4IF30 521 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 FAM107AO95990 144 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 WNT11O96014 354 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 SERPINA1P01009 418 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 IGKV3-15P01624 115 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 IGLV1-44P01699 117 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 IFNW1P05000 195 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 FUT4P22083 530 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 RPS4XP62701 263 aaKnown RBP17.32■□□□□ 0.36
CLTA-202ENST00000345519 KRT72Q14CN4 511 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 SPATS1Q496A3 300 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 HIKESHIQ53FT3 197 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 IFI44LQ53G44 452 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 HMBOX1Q6NT76 420 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 OR6X1Q8NH79 312 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 PFN4Q8NHR9 129 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 NEUROG1Q92886 237 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 ZNF837Q96EG3 531 aaPredicted RBP17.32■□□□□ 0.36
CLTA-202ENST00000345519 HSH2DQ96JZ2 352 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 CCT8L2Q96SF2 557 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 CRLF2Q9HC73 371 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 ARL8BQ9NVJ2 186 aa17.32■□□□□ 0.36
CLTA-202ENST00000345519 A0A1W2PR80 420 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 KPNA4O00629 521 aaPredicted RBP17.31■□□□□ 0.36
CLTA-202ENST00000345519 CLOCKO15516 846 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 SMPD2O60906 423 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 KRT33AO76009 404 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 OR7A10O76100 309 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 SOD3P08294 240 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 SPOCK1Q08629 439 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 HIST3H3Q16695 136 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 CEACAM16Q2WEN9 425 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 GPR137CQ8N3F9 429 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 FITM2Q8N6M3 262 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 C10orf53Q8N6V4 93 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 TMEM54Q969K7 222 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 TXNDC15Q96J42 360 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 EMC6Q9BV81 110 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 ANKRD19PQ9H560 264 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 DCAF13Q9NV06 445 aaKnown RBP17.31■□□□□ 0.36
CLTA-202ENST00000345519 HIF3AQ9Y2N7 669 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 MED31Q9Y3C7 131 aa17.31■□□□□ 0.36
CLTA-202ENST00000345519 CENPBD1B2RD01 187 aa17.3■□□□□ 0.36
CLTA-202ENST00000345519 SEMG1P04279 462 aa17.3■□□□□ 0.36
CLTA-202ENST00000345519 ZNF83P51522 516 aa17.3■□□□□ 0.36
CLTA-202ENST00000345519 NKX6-1P78426 367 aaPredicted RBP17.3■□□□□ 0.36
CLTA-202ENST00000345519 RPL18Q07020 188 aaKnown RBP17.3■□□□□ 0.36
CLTA-202ENST00000345519 ALKBH2Q6NS38 261 aa17.3■□□□□ 0.36
CLTA-202ENST00000345519 KLHL24Q6TFL4 600 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms