RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 CDCA4Q9BXL8 241 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 DUSP22Q9NRW4 184 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 TMEM45AQ9NWC5 275 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 GAB2Q9UQC2 676 aa6.64□□□□□ -1.35
ZNF540-202ENST00000343599 PLSCR5A0PG75 271 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 NPIPB8E9PQR5 432 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 ADAMDEC1O15204 470 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 ERAL1O75616 437 aaKnown RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 RGS11O94810 467 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 TIAF1O95411 115 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 IL1AP01583 271 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 MGAT1P26572 445 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 CRABP1P29762 137 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 PDHA2P29803 388 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 PEBP1P30086 187 aaKnown RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 CRADDP78560 199 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 EXOC3L2Q2M3D2 409 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 SYTL3Q4VX76 610 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 PAGE3Q5JUK9 113 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 LIPJQ5W064 366 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 OR2A2Q6IF42 318 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 GFRALQ6UXV0 394 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 DET1Q7L5Y6 550 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 GLT6D1Q7Z4J2 308 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 TMEM17Q86X19 198 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 ZFP82Q8N141 532 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 SVBPQ8N300 66 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 MEIOBQ8N635 442 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 SYT14Q8NB59 555 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 BPIFCQ8NFQ6 507 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 RXFP4Q8TDU9 374 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 CA5BP1Q8WTZ4 195 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 TFGQ92734 400 aaPredicted RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 KCNJ9Q92806 393 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 MEGF10Q96KG7 1140 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 AARSD1Q9BTE6 412 aaKnown RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 TMPRSS5Q9H3S3 457 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 CDCP1Q9H5V8 836 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 ZFP57Q9NU63 452 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 LEF1Q9UJU2 399 aaPredicted RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 A6NNC1 897 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 MYO1GB0I1T2 1018 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 SLC19A2O60779 497 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 SERPINA1P01009 418 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 NGFRP08138 427 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 RNH1P13489 461 aaKnown RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 SSTR4P31391 388 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 MAGEA2P43356 314 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 VSX2P58304 361 aaPredicted RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 TRA2BP62995 288 aaKnown RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 Q0VFX4 171 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 ZNF674Q2M3X9 581 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 DEFB113Q30KQ7 82 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 ZNF542PQ5EBM4 170 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 BCL2L15Q5TBC7 163 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 NKAIN2Q5VXU1 208 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 RAB12Q6IQ22 244 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 HEPHL1Q6MZM0 1159 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 TMEM88Q6PEY1 159 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 PUSL1Q8N0Z8 303 aaKnown RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 OR2L3Q8NG85 312 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 OR52K1Q8NGK4 314 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 OR10J5Q8NHC4 309 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 HOXB13Q92826 284 aaPredicted RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 OTUB1Q96FW1 271 aaPredicted RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 C12orf66Q96MD2 445 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 GGACTQ9BVM4 153 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 SLC6A16Q9GZN6 736 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 EGLN1Q9GZT9 426 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 LANCL2Q9NS86 450 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 SNTG1Q9NSN8 517 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 DLGAP4Q9Y2H0 992 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 PTRH2Q9Y3E5 179 aaKnown RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 SNX10Q9Y5X0 201 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 ELOA3DA6NLF2 546 aaPredicted RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 C1orf105O95561 183 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 PTBP3O95758 552 aaKnown RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 CXCL2P19875 107 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 UQCRC2P22695 453 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 APEX1P27695 318 aaKnown RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 NOS3P29474 1203 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 CRYBB2P43320 205 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 UQCRFS1P47985 274 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 PPP3R1P63098 170 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 SRSF6Q13247 344 aaKnown RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 SMCO1Q147U7 214 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 ELOA3BQ3SY89 546 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 AMZ1Q400G9 498 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 DNLZQ5SXM8 178 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 C10orf91Q5T1B1 145 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 UQCC3Q6UW78 93 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 FAM83HQ6ZRV2 1179 aaPredicted RBP6.63□□□□□ -1.35
ZNF540-202ENST00000343599 CBLN2Q8IUK8 224 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 SHISA5Q8N114 240 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 PYROXD2Q8N2H3 581 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 AMER3Q8N944 861 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 ELOA3Q8NG57 546 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 OR10H5Q8NGA6 315 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 OR5M9Q8NGP3 310 aa6.63□□□□□ -1.35
ZNF540-202ENST00000343599 OR9A1PQ8NGU1 263 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms