RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 HPCAP84074 193 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 EGR4Q05215 589 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 RAB39AQ14964 217 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 SLC9A3R2Q15599 337 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 MAPK11Q15759 364 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 NKPD1Q17RQ9 610 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 CARD17Q5XLA6 110 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 VRK2Q86Y07 508 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 ZNF584Q8IVC4 421 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 BHLHE22Q8NFJ8 381 aaPredicted RBP13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 MFSD8Q8NHS3 518 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 TRNT1Q96Q11 434 aaKnown RBP13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 HINT3Q9NQE9 182 aaKnown RBP13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 MARCOQ9UEW3 520 aaPredicted RBP13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 LEF1Q9UJU2 399 aaPredicted RBP13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 NUP50Q9UKX7 468 aa13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 ZNF346Q9UL40 294 aaKnown RBP13.9□□□□□ -0.18
NECTIN1-202ENST00000340882 DSPPQ9NZW4 1301 aa13.9□□□□□ -0.19
NECTIN1-202ENST00000340882 IGHV1-69-2A0A0G2JMI3 117 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 CDHR4A6H8M9 788 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 TRAF3IP2O43734 574 aaPredicted RBP13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 CCT5P48643 541 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 RPS23P62266 143 aaKnown RBP13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 GALK2Q01415 458 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 ATG16L1Q676U5 607 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 WBP2NLQ6ICG8 309 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 ZNF813Q6ZN06 617 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 ZNF836Q6ZNA1 936 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 USP51Q70EK9 711 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 JAZF1Q86VZ6 243 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 RNF130Q86XS8 419 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 C1QL4Q86Z23 238 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 PAQR4Q8N4S7 273 aaPredicted RBP13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 SYT14Q8NB59 555 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 PIK3C3Q8NEB9 887 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 OR8J2Q8NGG1 315 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 KTI12Q96EK9 354 aaPredicted RBP13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 OXGR1Q96P68 337 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 MECRQ9BV79 373 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 EMC6Q9BV81 110 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 ZMAT3Q9HA38 289 aaKnown RBP13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 CHST2Q9Y4C5 530 aa13.89□□□□□ -0.19
NECTIN1-202ENST00000340882 CLDN25C9JDP6 229 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 FAM157BP0CG42 384 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 HLA-DOBP13765 273 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 UQCRBP14927 111 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 B4GALT1P15291 398 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 ALDH3A1P30838 453 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 RAB1AP62820 205 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 MFSD13AQ14CX5 517 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 LRRC74BQ6ZQY2 392 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 RHOUQ7L0Q8 258 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 TRMT10CQ7L0Y3 403 aaKnown RBP13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 C20orf196Q8IYI0 205 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 CLIP4Q8N3C7 705 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 SLC25A28Q96A46 364 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 TMIGD2Q96BF3 282 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 TUBGCP3Q96CW5 907 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 SLC35A5Q9BS91 424 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 DPY30Q9C005 99 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 OR51B6Q9H340 312 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 MTHFD2LQ9H903 347 aaPredicted RBP13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 PLEK2Q9NYT0 353 aa13.88□□□□□ -0.19
NECTIN1-202ENST00000340882 IGLV3-9A0A075B6K5 115 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 PRSS51A0A1B0GVH4 220 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 TRAPPC2LH3BP13 241 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 M0R082 166 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 COPEO14579 308 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 NPHS1O60500 1241 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 AHSA1O95433 338 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 HPRP00739 348 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 DBIP07108 87 aaKnown RBP13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 FAM153BP0C7A2 387 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 CCL2P13500 99 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 PCGF2P35227 344 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 CHI3L1P36222 383 aaPredicted RBP13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 KRTAP10-3P60369 221 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 CKAP4Q07065 602 aaKnown RBP13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 C1DQ13901 141 aaKnown RBP13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 TSTQ16762 297 aaKnown RBP13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 ARMCX4Q5H9R4 360 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 COX20Q5RI15 118 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 RGS7BPQ6MZT1 257 aaPredicted RBP13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 TMEM154Q6P9G4 183 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 ZNF627Q7L945 461 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 RETREG3Q86VR2 466 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 C4orf33Q8N1A6 199 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 KIR3DL3Q8N743 410 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 ZNF417Q8TAU3 575 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 MGARPQ8TDB4 240 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 STK35Q8TDR2 534 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 WFDC12Q8WWY7 111 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 POP5Q969H6 163 aaKnown RBP13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 ZNF587Q96SQ5 575 aaPredicted RBP13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 GPA33Q99795 319 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 GAL3ST1Q99999 423 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 SLC7A8Q9UHI5 535 aa13.87□□□□□ -0.19
NECTIN1-202ENST00000340882 CLDN34H7C241 214 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 FZD7O75084 574 aa13.86□□□□□ -0.19
NECTIN1-202ENST00000340882 ZNF250P15622 560 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms