RNA–Protein interactions for RNA: ENST00000338910.8

PSPC1-201, Transcript of paraspeckle component 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PSPC1, Length 2,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-201ENST00000338910 FIGNL1Q6PIW4 674 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 SSX6Q7RTT6 188 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 ZNF454Q8N9F8 522 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 CLRN3Q8NCR9 226 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 NPAS1Q99742 590 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 CMC2Q9NRP2 79 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 SIDT1Q9NXL6 827 aaKnown RBP17.16■□□□□ 0.34
PSPC1-201ENST00000338910 COPS3Q9UNS2 423 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 PRELID3BQ9Y3B1 194 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 PCDHGA5Q9Y5G8 931 aa17.16■□□□□ 0.34
PSPC1-201ENST00000338910 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 SNRPGP15A8MWD9 76 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 CDC123O75794 336 aaPredicted RBP17.15■□□□□ 0.34
PSPC1-201ENST00000338910 IL5P05113 134 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 DCNP07585 359 aaKnown RBP17.15■□□□□ 0.34
PSPC1-201ENST00000338910 NOS3P29474 1203 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 CAPZA2P47755 286 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 MECP2P51608 486 aaKnown RBP17.15■□□□□ 0.34
PSPC1-201ENST00000338910 MGAT2Q10469 447 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 LINC00303Q3SY05 128 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 DCST2Q5T1A1 773 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 OLFML2AQ68BL7 652 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 ZC3H14Q6PJT7 736 aaKnown RBP17.15■□□□□ 0.34
PSPC1-201ENST00000338910 C17orf107Q6ZR85 190 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 OVCH1Q7RTY7 1134 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 COX18Q8N8Q8 333 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 SMPDL3BQ92485 455 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 MRPS24Q96EL2 167 aaKnown RBP17.15■□□□□ 0.34
PSPC1-201ENST00000338910 DERL3Q96Q80 235 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 KRCC1Q9NPI7 259 aaPredicted RBP17.15■□□□□ 0.34
PSPC1-201ENST00000338910 KLHL9Q9P2J3 617 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 KLK11Q9UBX7 282 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 ANKRD61A6NGH8 418 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 D6RAR5 112 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 PRG2P13727 222 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 GABRA3P34903 492 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 RAB38P57729 211 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 FOXK2Q01167 660 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 GK2Q14410 553 aaPredicted RBP17.15■□□□□ 0.34
PSPC1-201ENST00000338910 CLVS2Q5SYC1 327 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 PDZD9Q8IXQ8 264 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 EID2Q8N6I1 236 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 CDRT4Q8N9R6 151 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 HS6ST2Q96MM7 605 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 CD180Q99467 661 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 ARL6Q9H0F7 186 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 CHRDQ9H2X0 955 aa17.15■□□□□ 0.34
PSPC1-201ENST00000338910 GPN1Q9HCN4 374 aaPredicted RBP17.15■□□□□ 0.34
PSPC1-201ENST00000338910 EXOSC3Q9NQT5 275 aaKnown RBP17.15■□□□□ 0.34
PSPC1-201ENST00000338910 ZNF223Q9UK11 482 aaPredicted RBP17.15■□□□□ 0.34
PSPC1-201ENST00000338910 A0A087WV62 115 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 FAM86C2PA6NEL3 165 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 OR2W5A6NFC9 320 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 PEX12O00623 359 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 OR10H2O60403 315 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 SDC3O75056 442 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 KRT33AO76009 404 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 CLUP10909 449 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 BMP7P18075 431 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 MAKP20794 623 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 SLC2A5P22732 501 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 RPS11P62280 158 aaKnown RBP eCLIP17.14■□□□□ 0.33
PSPC1-201ENST00000338910 ZP2Q05996 745 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 ERV3-1Q14264 604 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 GRM7Q14831 915 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 CHCHD2P9Q5T1J5 151 aaPredicted RBP17.14■□□□□ 0.33
PSPC1-201ENST00000338910 OR5M9Q8NGP3 310 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 PNPLA2Q96AD5 504 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 SLC25A38Q96DW6 304 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 PEX11GQ96HA9 241 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 SLC38A3Q99624 504 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 PRSS27Q9BQR3 290 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 OPN4Q9UHM6 478 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 KCNE5Q9UJ90 142 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 VPS13AQ96RL7 3174 aa17.14■□□□□ 0.33
PSPC1-201ENST00000338910 OGG1O15527 345 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 APOC3P02656 99 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 GKN3PP0CG01 181 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 BCKDHBP21953 392 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 CSNK1EP49674 416 aaKnown RBP17.13■□□□□ 0.33
PSPC1-201ENST00000338910 GDI2P50395 445 aaKnown RBP17.13■□□□□ 0.33
PSPC1-201ENST00000338910 MAT1AQ00266 395 aaKnown RBP17.13■□□□□ 0.33
PSPC1-201ENST00000338910 DUSP8Q13202 625 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 DEFB133Q30KQ1 61 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 GSG1LQ6UXU4 331 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 THSD4Q6ZMP0 1018 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 GKN2Q86XP6 184 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 ARHGEF39Q8N4T4 335 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 ATOH1Q92858 354 aaPredicted RBP17.13■□□□□ 0.33
PSPC1-201ENST00000338910 SMIM19Q96E16 107 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 ZNF350Q9GZX5 532 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 C20orf141Q9NUB4 165 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 ANKRD20A5PA0PJZ0 165 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 GXYLT2A0PJZ3 443 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 ABCD4O14678 606 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 KHDRBS3O75525 346 aaKnown RBP17.13■□□□□ 0.33
PSPC1-201ENST00000338910 EEF1A1P68104 462 aaKnown RBP17.13■□□□□ 0.33
PSPC1-201ENST00000338910 FAAP20Q6NZ36 180 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 RFLNBQ8N5W9 214 aa17.13■□□□□ 0.33
PSPC1-201ENST00000338910 ARSGQ96EG1 525 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms