RNA–Protein interactions for RNA: ENST00000338399.8

CDK5RAP3-201, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP3, Length 1,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-201ENST00000338399 ZADH2Q8N4Q0 377 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 SVOPQ8N4V2 548 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ARIH2OSQ8N7S6 290 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 ADPRHL1Q8NDY3 354 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 OR52I1Q8NGK6 324 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TMEM80Q96HE8 168 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 VCX3AQ9NNX9 186 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 MRPS18AQ9NVS2 196 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 TAS2R16Q9NYV7 291 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 PCDHGB1Q9Y5G3 927 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 FRYQ5TBA9 3013 aa13.21□□□□□ -0.29
CDK5RAP3-201ENST00000338399 A0A1W2PNV4 684 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 CCDC182A6NF36 153 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 AQP7P3A6NL99 342 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 LINC01387J3KSC0 135 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ACOT7O00154 380 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ARHGEF9O43307 516 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RAMP1O60894 148 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 IGHMP01871 453 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 CSNK2A1P68400 391 aaPredicted RBP13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RAB40BQ12829 278 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SLC10A1Q14973 349 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RNFT1Q5M7Z0 435 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TMEM225Q6GV28 225 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PAQR6Q6TCH4 344 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PXKQ7Z7A4 578 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 FAM109AQ8N4B1 249 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 OR51L1Q8NGJ5 315 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ZNF519Q8TB69 540 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TM9SF4Q92544 642 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TEAD3Q99594 435 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 DEFB127Q9H1M4 99 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 FANCFQ9NPI8 374 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ACOT13Q9NPJ3 140 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RPRD1BQ9NQG5 326 aaKnown RBP13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ASB6Q9NWX5 421 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 QPCTLQ9NXS2 382 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 B3GAT1Q9P2W7 334 aa13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PCDHGA9Q9Y5G4 932 aaKnown RBP13.21□□□□□ -0.3
CDK5RAP3-201ENST00000338399 LAMA5O15230 3695 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ZNF407Q9C0G0 2248 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 IGHV3-15A0A0B4J1V0 119 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SLC22A31A6NKX4 558 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 NPIPA5E9PKD4 350 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 K7ENP7 123 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 M0R3G1 203 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 XKRYO14609 159 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 BCL10O95999 233 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ITGB2P05107 769 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 IFNGR1P15260 489 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 HSF1Q00613 529 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ZNF239Q16600 458 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 HBMQ6B0K9 141 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 INO80CQ6PI98 192 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 IGFL3Q6UXB1 125 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ESPNLQ6ZVH7 1005 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SLC35D2Q76EJ3 337 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 GPAT4Q86UL3 456 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 OR4F15Q8NGB8 312 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 FAR1Q8WVX9 515 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ZNRF4Q8WWF5 429 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 KISS1RQ969F8 398 aaPredicted RBP13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SRXN1Q9BYN0 137 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 NMNAT2Q9BZQ4 307 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 MED29Q9NX70 200 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 WARS2Q9UGM6 360 aaKnown RBP13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 NPIPA1Q9UND3 350 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RAXQ9Y2V3 346 aa13.2□□□□□ -0.3
CDK5RAP3-201ENST00000338399 IRGMA1A4Y4 181 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 EIF1BO60739 113 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RAB36O95755 333 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 RENP00797 406 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 PDGFAP04085 211 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 JUNBP17275 347 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 SPI1P17947 270 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 GSTT1P30711 240 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ATP6V1E1P36543 226 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 CLDN15P56746 228 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 CARD18P57730 90 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 H3F3AP84243 136 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 IRF3Q14653 427 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ARMC4Q5T2S8 1044 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 BORAQ6PGQ7 559 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 LRRC69Q6ZNQ3 347 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TRILQ7L0X0 811 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 UEVLDQ8IX04 471 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 OR51G2Q8NGK0 314 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TXNDC15Q96J42 360 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 ADGRG7Q96K78 797 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 TSSK2Q96PF2 358 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 UCN2Q96RP3 112 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 NAA11Q9BSU3 229 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 CDCA4Q9BXL8 241 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 FGF20Q9NP95 211 aaPredicted RBP13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 DIMT1Q9UNQ2 313 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 EXOGQ9Y2C4 368 aaKnown RBP13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 LIPGQ9Y5X9 500 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 DNAJC13O75165 2243 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 CXCL13O43927 109 aa13.19□□□□□ -0.3
CDK5RAP3-201ENST00000338399 INMTO95050 263 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms