RNA–Protein interactions for RNA: ENST00000338045.7

LIMS1-202, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-202ENST00000338045 TSTQ16762 297 aaKnown RBP13.91□□□□□ -0.18
LIMS1-202ENST00000338045 GLYR1Q49A26 553 aaPredicted RBP13.91□□□□□ -0.18
LIMS1-202ENST00000338045 LINC01590Q5TEZ4 76 aa13.91□□□□□ -0.18
LIMS1-202ENST00000338045 LCN1P1Q5VSP4 162 aa13.91□□□□□ -0.18
LIMS1-202ENST00000338045 ADCK1Q86TW2 530 aa13.91□□□□□ -0.18
LIMS1-202ENST00000338045 POMGNT2Q8NAT1 580 aa13.91□□□□□ -0.18
LIMS1-202ENST00000338045 ADPRHL1Q8NDY3 354 aa13.91□□□□□ -0.18
LIMS1-202ENST00000338045 ZNRF4Q8WWF5 429 aa13.91□□□□□ -0.18
LIMS1-202ENST00000338045 THAP4Q8WY91 577 aa13.91□□□□□ -0.18
LIMS1-202ENST00000338045 TM9SF4Q92544 642 aa13.91□□□□□ -0.18
LIMS1-202ENST00000338045 JSRP1Q96MG2 331 aaPredicted RBP13.91□□□□□ -0.18
LIMS1-202ENST00000338045 ARHGAP9Q9BRR9 750 aa13.91□□□□□ -0.18
LIMS1-202ENST00000338045 TIMMDC1Q9NPL8 285 aa13.91□□□□□ -0.18
LIMS1-202ENST00000338045 RABL2AQ9UBK7 228 aaPredicted RBP13.91□□□□□ -0.18
LIMS1-202ENST00000338045 TCEA1P23193 301 aaKnown RBP13.9□□□□□ -0.18
LIMS1-202ENST00000338045 GADD45AP24522 165 aa13.9□□□□□ -0.18
LIMS1-202ENST00000338045 GTF2E2P29084 291 aaKnown RBP13.9□□□□□ -0.18
LIMS1-202ENST00000338045 CASRP41180 1078 aa13.9□□□□□ -0.18
LIMS1-202ENST00000338045 ACSM1Q08AH1 577 aa13.9□□□□□ -0.18
LIMS1-202ENST00000338045 C19orf57Q0VDD7 668 aa13.9□□□□□ -0.18
LIMS1-202ENST00000338045 SPCS2Q15005 226 aa13.9□□□□□ -0.18
LIMS1-202ENST00000338045 ZNF239Q16600 458 aaKnown RBP13.9□□□□□ -0.18
LIMS1-202ENST00000338045 ATP1A1-AS1Q5TC04 95 aa13.9□□□□□ -0.18
LIMS1-202ENST00000338045 VASH2Q86V25 355 aa13.9□□□□□ -0.18
LIMS1-202ENST00000338045 TMEM99Q8N816 258 aa13.9□□□□□ -0.18
LIMS1-202ENST00000338045 RPL3LQ92901 407 aaKnown RBP13.9□□□□□ -0.18
LIMS1-202ENST00000338045 RELTQ969Z4 430 aa13.9□□□□□ -0.18
LIMS1-202ENST00000338045 PPP1R14BQ96C90 147 aa13.9□□□□□ -0.18
LIMS1-202ENST00000338045 TIMP4Q99727 224 aa13.9□□□□□ -0.18
LIMS1-202ENST00000338045 UTP23Q9BRU9 249 aaKnown RBP13.9□□□□□ -0.18
LIMS1-202ENST00000338045 RPRD1BQ9NQG5 326 aaKnown RBP13.9□□□□□ -0.18
LIMS1-202ENST00000338045 DKKL1Q9UK85 242 aa13.9□□□□□ -0.18
LIMS1-202ENST00000338045 CAB39Q9Y376 341 aaPredicted RBP13.9□□□□□ -0.18
LIMS1-202ENST00000338045 MRPS18CQ9Y3D5 142 aaKnown RBP13.9□□□□□ -0.18
LIMS1-202ENST00000338045 A0A1W2PNV4 684 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 OR2M5A3KFT3 312 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 SERPINI2O75830 405 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 GLCEO94923 617 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 SHC1P29353 583 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 CD79BP40259 229 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 TLE3Q04726 772 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 FOXO1Q12778 655 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 GALEQ14376 348 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 SPINK14Q6IE38 97 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 GALNT16Q8N428 558 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 KLHL36Q8N4N3 616 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 ZNF248Q8NDW4 579 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 SMPDL3BQ92485 455 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 ZMYND19Q96E35 227 aaPredicted RBP13.89□□□□□ -0.19
LIMS1-202ENST00000338045 DCUN1D5Q9BTE7 237 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 TMEM185BQ9H7F4 350 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 MOKQ9UQ07 419 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 TRAPPC4Q9Y296 219 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 RPH3AQ9Y2J0 694 aaPredicted RBP13.89□□□□□ -0.19
LIMS1-202ENST00000338045 CEP250Q9BV73 2442 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 MED13Q9UHV7 2174 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 AIREO43918 545 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 WDPCPO95876 746 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 MRPL3P09001 348 aaKnown RBP13.89□□□□□ -0.19
LIMS1-202ENST00000338045 CPEP16870 476 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 ZNF182P17025 639 aaPredicted RBP13.89□□□□□ -0.19
LIMS1-202ENST00000338045 P2RY4P51582 365 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 RRADP55042 308 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 ACTC1P68032 377 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 ACTA1P68133 377 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 NHLH1Q02575 133 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 TPBGQ13641 420 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 RAET1LQ5VY80 246 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 ZNF322Q6U7Q0 402 aaPredicted RBP13.89□□□□□ -0.19
LIMS1-202ENST00000338045 PXKQ7Z7A4 578 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 PHC2Q8IXK0 858 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 GHDCQ8N2G8 530 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 OR51L1Q8NGJ5 315 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 GATAD2BQ8WXI9 593 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 MIB2Q96AX9 1013 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 SIGLEC12Q96PQ1 595 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 OR5B2Q96R09 309 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 CNN2Q99439 309 aaKnown RBP13.89□□□□□ -0.19
LIMS1-202ENST00000338045 PIGQQ9BRB3 760 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 ALG12Q9BV10 488 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 NDUFB11Q9NX14 153 aa13.89□□□□□ -0.19
LIMS1-202ENST00000338045 A0A1W2PRG6 482 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 DAPL1A0PJW8 107 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 PRSS37A4D1T9 235 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 XKRYO14609 159 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 ARHGEF9O43307 516 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 AKR7A3O95154 331 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 PLGP00747 810 aaPredicted RBP13.88□□□□□ -0.19
LIMS1-202ENST00000338045 RENP00797 406 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 TFP02787 698 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 HLA-DOBP13765 273 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 ACVR1BP36896 505 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 B3GALT5-AS1P59052 145 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 SRSF6Q13247 344 aaKnown RBP13.88□□□□□ -0.19
LIMS1-202ENST00000338045 TMEM176BQ3YBM2 270 aaPredicted RBP13.88□□□□□ -0.19
LIMS1-202ENST00000338045 TIMM50Q3ZCQ8 353 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 EEF1A1P5Q5VTE0 462 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 NHLRC1Q6VVB1 395 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 TMPPEQ6ZT21 453 aa13.88□□□□□ -0.19
LIMS1-202ENST00000338045 OR6V1Q8N148 313 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms