RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 DDOQ99489 341 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 CDCA4Q9BXL8 241 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 CCDC86Q9H6F5 360 aaKnown RBP13.18□□□□□ -0.3
CBX3-201ENST00000337620 RPRD1BQ9NQG5 326 aaKnown RBP13.18□□□□□ -0.3
CBX3-201ENST00000337620 ASB6Q9NWX5 421 aa13.18□□□□□ -0.3
CBX3-201ENST00000337620 WARS2Q9UGM6 360 aaKnown RBP13.18□□□□□ -0.3
CBX3-201ENST00000337620 SMIM31A0A1B0GVY4 71 aa13.17□□□□□ -0.3
CBX3-201ENST00000337620 NPIPA5E9PKD4 350 aa13.17□□□□□ -0.3
CBX3-201ENST00000337620 H3BSA7 217 aa13.17□□□□□ -0.3
CBX3-201ENST00000337620 EIF1AYO14602 144 aaKnown RBP13.17□□□□□ -0.3
CBX3-201ENST00000337620 POU3F2P20265 443 aaPredicted RBP13.17□□□□□ -0.3
CBX3-201ENST00000337620 SLC2A5P22732 501 aa13.17□□□□□ -0.3
CBX3-201ENST00000337620 DCKP27707 260 aa13.17□□□□□ -0.3
CBX3-201ENST00000337620 PSMB9P28065 219 aa13.17□□□□□ -0.3
CBX3-201ENST00000337620 EIF2S3P41091 472 aaKnown RBP13.17□□□□□ -0.3
CBX3-201ENST00000337620 GPAT4Q86UL3 456 aa13.17□□□□□ -0.3
CBX3-201ENST00000337620 ZFP62Q8NB50 900 aaPredicted RBP13.17□□□□□ -0.3
CBX3-201ENST00000337620 TSSK2Q96PF2 358 aa13.17□□□□□ -0.3
CBX3-201ENST00000337620 TUBA1CQ9BQE3 449 aa13.17□□□□□ -0.3
CBX3-201ENST00000337620 FAM192AQ9GZU8 254 aa13.17□□□□□ -0.3
CBX3-201ENST00000337620 NDUFA13Q9P0J0 144 aa13.17□□□□□ -0.3
CBX3-201ENST00000337620 CLEC2DQ9UHP7 191 aa13.17□□□□□ -0.3
CBX3-201ENST00000337620 NPIPA1Q9UND3 350 aa13.17□□□□□ -0.3
CBX3-201ENST00000337620 DIMT1Q9UNQ2 313 aaKnown RBP13.17□□□□□ -0.3
CBX3-201ENST00000337620 APC2O95996 2303 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 CCDC182A6NF36 153 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 ZNF814B7Z6K7 855 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 GLSO94925 669 aaPredicted RBP13.16□□□□□ -0.3
CBX3-201ENST00000337620 RENP00797 406 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 PTHP01270 115 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 IFNGR1P15260 489 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 SPI1P17947 270 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 KLK2P20151 261 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 GSTT1P30711 240 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 GFRA1P56159 465 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 CSNK2A1P68400 391 aaPredicted RBP13.16□□□□□ -0.3
CBX3-201ENST00000337620 HSF1Q00613 529 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 LGALS3BPQ08380 585 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 IRF3Q14653 427 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 TBCEQ15813 527 aaPredicted RBP13.16□□□□□ -0.3
CBX3-201ENST00000337620 PXKQ7Z7A4 578 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 SLC22A16Q86VW1 577 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 C9orf43Q8TAL5 461 aaPredicted RBP13.16□□□□□ -0.3
CBX3-201ENST00000337620 KISS1RQ969F8 398 aaPredicted RBP13.16□□□□□ -0.3
CBX3-201ENST00000337620 ZMYND19Q96E35 227 aaPredicted RBP13.16□□□□□ -0.3
CBX3-201ENST00000337620 SMAD5Q99717 465 aaKnown RBP13.16□□□□□ -0.3
CBX3-201ENST00000337620 RERGLQ9H628 205 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 SRA1Q9HD15 236 aaKnown RBP13.16□□□□□ -0.3
CBX3-201ENST00000337620 FGF20Q9NP95 211 aaPredicted RBP13.16□□□□□ -0.3
CBX3-201ENST00000337620 TNFRSF10DQ9UBN6 386 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 ERGIC3Q9Y282 383 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 EXOGQ9Y2C4 368 aaKnown RBP13.16□□□□□ -0.3
CBX3-201ENST00000337620 FAM171A2A8MVW0 826 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 FZD7O75084 574 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 BCL10O95999 233 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 MRPL3P09001 348 aaKnown RBP13.16□□□□□ -0.3
CBX3-201ENST00000337620 MYL12AP19105 171 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 CD97P48960 835 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 P2RY4P51582 365 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 GP2P55259 537 aaKnown RBP13.16□□□□□ -0.3
CBX3-201ENST00000337620 PON3Q15166 354 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 PAQR6Q6TCH4 344 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 SLC35D2Q76EJ3 337 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 ALPK2Q86TB3 2170 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 PM20D2Q8IYS1 436 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 ADPRHL1Q8NDY3 354 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 OR13F1Q8NGS4 319 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 ZNF519Q8TB69 540 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 ZNRF4Q8WWF5 429 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 NMNAT2Q9BZQ4 307 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 CHCHD3Q9NX63 227 aaKnown RBP13.16□□□□□ -0.3
CBX3-201ENST00000337620 MED29Q9NX70 200 aa13.16□□□□□ -0.3
CBX3-201ENST00000337620 IGHV3-15A0A0B4J1V0 119 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 A0A1W2PNV4 684 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 AQP7P3A6NL99 342 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 RRP8O43159 456 aaKnown RBP13.15□□□□□ -0.3
CBX3-201ENST00000337620 EIF1BO60739 113 aaKnown RBP13.15□□□□□ -0.3
CBX3-201ENST00000337620 RAMP1O60894 148 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 IGHMP01871 453 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 ETV1P50549 477 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 DAP3P51398 398 aaKnown RBP13.15□□□□□ -0.3
CBX3-201ENST00000337620 CARD18P57730 90 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 TMED1Q13445 227 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 MED22Q15528 200 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 HYAL4Q2M3T9 481 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 ARMC4Q5T2S8 1044 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 UBE2UQ5VVX9 321 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 HBMQ6B0K9 141 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 B3GNT6Q6ZMB0 384 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 ADCK1Q86TW2 530 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 GGNQ86UU5 652 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 UEVLDQ8IX04 471 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 OR6K6Q8NGW6 343 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 FCGR1BQ92637 280 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 CRELD1Q96HD1 420 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 TXNDC15Q96J42 360 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 SYT4Q9H2B2 425 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 SLC6A15Q9H2J7 730 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 B3GAT1Q9P2W7 334 aa13.15□□□□□ -0.3
CBX3-201ENST00000337620 SSUH2Q9Y2M2 353 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms