RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 KPNA4O00629 521 aaPredicted RBP24.17■■□□□ 1.46
ATPAF1-201ENST00000329231 SOD3P08294 240 aa24.17■■□□□ 1.46
ATPAF1-201ENST00000329231 ADORA3P0DMS8 318 aa24.17■■□□□ 1.46
ATPAF1-201ENST00000329231 UBE2NP61088 152 aaKnown RBP24.17■■□□□ 1.46
ATPAF1-201ENST00000329231 MAGEE2Q8TD90 523 aaPredicted RBP24.17■■□□□ 1.46
ATPAF1-201ENST00000329231 BCL2L2Q92843 193 aaPredicted RBP24.17■■□□□ 1.46
ATPAF1-201ENST00000329231 ALG2Q9H553 416 aa24.17■■□□□ 1.46
ATPAF1-201ENST00000329231 GPR35Q9HC97 309 aa24.17■■□□□ 1.46
ATPAF1-201ENST00000329231 RIMS3Q9UJD0 308 aa24.17■■□□□ 1.46
ATPAF1-201ENST00000329231 ZNF229Q9UJW7 825 aa24.17■■□□□ 1.46
ATPAF1-201ENST00000329231 POU2F3Q9UKI9 436 aa24.17■■□□□ 1.46
ATPAF1-201ENST00000329231 NME4O00746 187 aa24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 GSTA4O15217 222 aa24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 HIST1H2ABP04908 130 aa24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 HOXB1P14653 301 aaPredicted RBP24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 FOSL1P15407 271 aa24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 RBM34P42696 430 aaKnown RBP24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 PIN1Q13526 163 aaPredicted RBP24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 PGGHGQ32M88 737 aa24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 HIST3H2AQ7L7L0 130 aa24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 CCDC197Q8NCU1 140 aa24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 HIST1H2ACQ93077 130 aa24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 LRR1Q96L50 414 aa24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 DLL4Q9NR61 685 aa24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 MED29Q9NX70 200 aa24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 GMPR2Q9P2T1 348 aaKnown RBP24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 TAGLN3Q9UI15 199 aa24.16■■□□□ 1.46
ATPAF1-201ENST00000329231 MAP1AP78559 2803 aaPredicted RBP24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 SLC35F4A4IF30 521 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 ZNF726A6NNF4 738 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 C11orf98E9PRG8 122 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 CXCR6O00574 342 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 THRBP10828 461 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 PSME3P61289 254 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 SPOCK1Q08629 439 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 CARD17Q5XLA6 110 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 NHLRC1Q6VVB1 395 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 YTHDF3Q7Z739 585 aaKnown RBP24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 C20orf196Q8IYI0 205 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 TXNDC15Q96J42 360 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 EMC6Q9BV81 110 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 CRLF2Q9HC73 371 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 B3GAT2Q9NPZ5 323 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 ARL8BQ9NVJ2 186 aa24.15■■□□□ 1.46
ATPAF1-201ENST00000329231 A0A096LPE4 126 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 ARPC4-TTLL3A0A0A6YYG9 625 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 A0A1W2PPZ6 126 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 SERPINI2O75830 405 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 MT-ND1P03886 318 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 UMPSP11172 480 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 IFNA8P32881 189 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 GSK3BP49841 420 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 ATP5J2P56134 94 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 ARF1P84077 181 aaKnown RBP24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 ZP4Q12836 540 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 CEACAM16Q2WEN9 425 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 NKAIN4Q8IVV8 208 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 GTPBP3Q969Y2 492 aaKnown RBP24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 HS6ST2Q96MM7 605 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 MOV10Q9HCE1 1003 aaKnown RBP24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 MEPEQ9NQ76 525 aaPredicted RBP24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 ABCD2Q9UBJ2 740 aa24.14■■□□□ 1.45
ATPAF1-201ENST00000329231 M0R3G1 203 aa24.13■■□□□ 1.45
ATPAF1-201ENST00000329231 OVOL3O00110 214 aa24.13■■□□□ 1.45
ATPAF1-201ENST00000329231 ASAH2BP0C7U1 165 aa24.13■■□□□ 1.45
ATPAF1-201ENST00000329231 LRRC17Q8N6Y2 441 aa24.13■■□□□ 1.45
ATPAF1-201ENST00000329231 TMEM255BQ8WV15 326 aa24.13■■□□□ 1.45
ATPAF1-201ENST00000329231 TMEM239Q8WW34 195 aa24.13■■□□□ 1.45
ATPAF1-201ENST00000329231 TRMT61AQ96FX7 289 aaKnown RBP24.13■■□□□ 1.45
ATPAF1-201ENST00000329231 DHRS9Q9BPW9 319 aa24.13■■□□□ 1.45
ATPAF1-201ENST00000329231 KCTD14Q9BQ13 255 aaPredicted RBP24.13■■□□□ 1.45
ATPAF1-201ENST00000329231 TAS2R5Q9NYW4 299 aa24.13■■□□□ 1.45
ATPAF1-201ENST00000329231 RNF13O43567 381 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 IGF2P01344 180 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 IFNGR1P15260 489 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 ST3GAL3Q11203 375 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 KRT72Q14CN4 511 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 AGAP6Q5VW22 663 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 NANOGNBQ7Z5D8 188 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 DTX2Q86UW9 622 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 FITM2Q8N6M3 262 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 OR6N1Q8NGY5 312 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 PRRC1Q96M27 445 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 ADAD1Q96M93 576 aaKnown RBP24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 TRAF4Q9BUZ4 470 aaPredicted RBP24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 GRIP2Q9C0E4 1043 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 NELFAQ9H3P2 528 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 SPAG4Q9NPE6 437 aa24.12■■□□□ 1.45
ATPAF1-201ENST00000329231 USF3Q68DE3 2245 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 ZNF99A8MXY4 864 aaPredicted RBP24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 E7EQL1 145 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 ZNF682O95780 498 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 IFNW1P05000 195 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 UGT2B15P54855 530 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 CAMK2DQ13557 499 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 PHYHD1Q5SRE7 291 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 CBLL1Q75N03 491 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 SLC35D2Q76EJ3 337 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 SLC46A3Q7Z3Q1 461 aa24.11■■□□□ 1.45
ATPAF1-201ENST00000329231 VTCN1Q7Z7D3 282 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms