RNA–Protein interactions for RNA: ENST00000316105.6

PCDHB9-201, Transcript of protocadherin beta 9, humanhuman

APPRIS P1 BASIC

Gene PCDHB9, Length 4,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9-201ENST00000316105 ZFAND5O76080 213 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 LTBQ06643 244 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 CD300CQ08708 224 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 UBE2NLQ5JXB2 153 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 TMEM164Q5U3C3 297 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 ALKBH2Q6NS38 261 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 FAM180AQ6UWF9 173 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 SLC25A44Q96H78 314 aaPredicted RBP12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 DPCDQ9BVM2 203 aaPredicted RBP12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 HHLA2Q9UM44 414 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 ALPK2Q86TB3 2170 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 C4orf51C9J302 202 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 ZNF878C9JN71 531 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 ICOSLGO75144 302 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 MYF5P13349 255 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 PGAM2P15259 253 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 SRMP19623 302 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 ALKBH1Q13686 389 aaKnown RBP12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 ATXN7L3Q14CW9 347 aaPredicted RBP12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 MEP1BQ16820 701 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 CDNFQ49AH0 187 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 SLC7A6Q92536 515 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 PGAM5Q96HS1 289 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 MAN2C1Q9NTJ4 1040 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 ACAD8Q9UKU7 415 aa12.28□□□□□ -0.44
PCDHB9-201ENST00000316105 TMEM269A0A1B0GVZ9 245 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 METTL12A8MUP2 240 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 SEC14L5O43304 696 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 CBX7O95931 251 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 JMJD7P0C870 316 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 ACTBP60709 375 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 ACTG1P63261 375 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 EEF1A1P68104 462 aaKnown RBP12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 SNTA1Q13424 505 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 GAB4Q2WGN9 574 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 ULBP3Q9BZM4 244 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 DOK2O60496 412 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 DNAJB6O75190 326 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 CSTBP04080 98 aaKnown RBP12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 AMY2AP04746 511 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 GABRB1P18505 474 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 HTR2AP28223 471 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 SRP9P49458 86 aaKnown RBP12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 SPOCK1Q08629 439 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 DBPQ10586 325 aaPredicted RBP12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 FGFBP1Q14512 234 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 LRRC37A5PQ49AS3 106 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 FAM69AQ5T7M9 428 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 HACD4Q5VWC8 232 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 ZNF704Q6ZNC4 412 aaPredicted RBP12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 SLC16A9Q7RTY1 509 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 ABI3BPQ7Z7G0 1075 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 SIAH3Q8IW03 269 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 FTMTQ8N4E7 242 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 EID2Q8N6I1 236 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 FYTTD1Q96QD9 318 aaKnown RBP12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 FBXL4Q9UKA2 621 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 PCOLCE2Q9UKZ9 415 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 PLEKHA6Q9Y2H5 1048 aa12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 PTRH2Q9Y3E5 179 aaKnown RBP12.27□□□□□ -0.44
PCDHB9-201ENST00000316105 LMO7DNF2Z398 122 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 INHBBP09529 407 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 RAB40ALP0C0E4 278 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 FGF9P31371 208 aaPredicted RBP12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 CD79BP40259 229 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 RPL18Q07020 188 aaKnown RBP12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 SMAD4Q13485 552 aaKnown RBP12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 YIF1BQ5BJH7 314 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 KCTD9Q7L273 389 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 NDUFAF7Q7L592 441 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 PRSS45Q7RTY3 260 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 TMEM17Q86X19 198 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 RAB40AQ8WXH6 277 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 C7orf50Q9BRJ6 194 aaKnown RBP12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 LIN7BQ9HAP6 207 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 UTRNP46939 3433 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 A0A0B4J203 849 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 CENPVL1A0A0U1RR11 272 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 NAP1L6A6NFF2 107 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 EPOPA6NHQ4 379 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 LILRA5A6NI73 299 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 TMEM212A6NML5 194 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 DCNP07585 359 aaKnown RBP12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 RRAS2P62070 204 aaPredicted RBP12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 GPLD1P80108 840 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 MRPS10P82664 201 aaKnown RBP12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 SMCO1Q147U7 214 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 APOOLQ6UXV4 268 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 ESPNLQ6ZVH7 1005 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 TSEN54Q7Z6J9 526 aaKnown RBP12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 ASB17Q8WXJ9 295 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 SLC41A2Q96JW4 573 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 MEPEQ9NQ76 525 aaPredicted RBP12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 DNAJB12Q9NXW2 375 aaKnown RBP12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 SIT1Q9Y3P8 196 aa12.27□□□□□ -0.45
PCDHB9-201ENST00000316105 IGHV5-51A0A0C4DH38 117 aa12.26□□□□□ -0.45
PCDHB9-201ENST00000316105 ANKRD61A6NGH8 418 aa12.26□□□□□ -0.45
PCDHB9-201ENST00000316105 A8MVM7 634 aa12.26□□□□□ -0.45
PCDHB9-201ENST00000316105 TNFRSF10AO00220 468 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms