RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 RIN1Q13671 783 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 ABCA11PQ4W5N1 156 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.49□□□□□ -0.41
DDX54-202ENST00000314045 SLC16A14Q7RTX9 510 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 ARIH2OSQ8N7S6 290 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 CHST11Q9NPF2 352 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 VSX1Q9NZR4 365 aaPredicted RBP12.49□□□□□ -0.41
DDX54-202ENST00000314045 MYEF2Q9P2K5 600 aaKnown RBP12.49□□□□□ -0.41
DDX54-202ENST00000314045 KLHL13Q9P2N7 655 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 NOSIPQ9Y314 301 aaKnown RBP12.49□□□□□ -0.41
DDX54-202ENST00000314045 V9GY05 133 aa12.49□□□□□ -0.41
DDX54-202ENST00000314045 ZC3H12DA2A288 527 aaKnown RBP12.48□□□□□ -0.41
DDX54-202ENST00000314045 SF3A2Q15428 464 aaKnown RBP12.48□□□□□ -0.41
DDX54-202ENST00000314045 STK11Q15831 433 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 SLC35D3Q5M8T2 416 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 FIP1L1Q6UN15 594 aaKnown RBP12.48□□□□□ -0.41
DDX54-202ENST00000314045 BAIAP2L2Q6UXY1 529 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 PRSS42Q7Z5A4 293 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 ZNF584Q8IVC4 421 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 ZNF454Q8N9F8 522 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 FAM46BQ96A09 425 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 SCARF2Q96GP6 870 aaPredicted RBP12.48□□□□□ -0.41
DDX54-202ENST00000314045 OR10A2Q9H208 303 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 P4HTMQ9NXG6 502 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 POU2F3Q9UKI9 436 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 FBXO4Q9UKT5 387 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 WRBO00258 174 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 CAV3P56539 151 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 PCBD1P61457 104 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 SELENBP1Q13228 472 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 CCBE1Q6UXH8 406 aaPredicted RBP12.48□□□□□ -0.41
DDX54-202ENST00000314045 MENTQ9BUN1 341 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 CALHM2Q9HA72 323 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 SLC25A19Q9HC21 320 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 GALNT9Q9HCQ5 603 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 LOC102725191A0A1B0GVB3 256 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 STMND1H3BQB6 276 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 HSPA12AO43301 675 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 SELENOFO60613 162 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 DPM1O60762 260 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 CD40LGP29965 261 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 HSF1Q00613 529 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 AWAT2Q6E213 333 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 NDUFAF7Q7L592 441 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 MRPL21Q7Z2W9 205 aaKnown RBP12.48□□□□□ -0.41
DDX54-202ENST00000314045 ANKRD37Q7Z713 158 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 GDPD1Q8N9F7 314 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 MEPEQ9NQ76 525 aaPredicted RBP12.48□□□□□ -0.41
DDX54-202ENST00000314045 COA3Q9Y2R0 106 aaPredicted RBP12.48□□□□□ -0.41
DDX54-202ENST00000314045 GABARAPO95166 117 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 SDHAP31040 664 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 HMGA2P52926 109 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 TRIP6Q15654 476 aaKnown RBP12.48□□□□□ -0.41
DDX54-202ENST00000314045 TMEM52Q8NDY8 209 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 SCGB3A2Q96PL1 93 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 CST11Q9H112 138 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 ZNF768Q9H5H4 540 aaKnown RBP12.48□□□□□ -0.41
DDX54-202ENST00000314045 APMAPQ9HDC9 416 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 NUFIP1Q9UHK0 495 aaKnown RBP12.48□□□□□ -0.41
DDX54-202ENST00000314045 SH3BGRL2Q9UJC5 107 aa12.48□□□□□ -0.41
DDX54-202ENST00000314045 ZNF346Q9UL40 294 aaKnown RBP12.48□□□□□ -0.41
DDX54-202ENST00000314045 A0A087WUJ7 227 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 PIPP12273 146 aaPredicted RBP12.47□□□□□ -0.41
DDX54-202ENST00000314045 AVPR2P30518 371 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 APLNRP35414 380 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 TEKQ02763 1124 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 NANOGP1Q8N7R0 232 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 SIMC1Q8NDZ2 872 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 OR5D14Q8NGL3 314 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 MRGPRX4Q96LA9 322 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 C10orf90Q96M02 699 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 CCDC32Q9BV29 185 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 TXNL4BQ9NX01 149 aaKnown RBP12.47□□□□□ -0.41
DDX54-202ENST00000314045 IGHV5-10-1A0A0J9YXX1 117 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 A0A1B0GVC2 190 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 TMEM129A0AVI4 362 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 A6NIN4 97 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 VAMP5O95183 116 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 SLC2A5P22732 501 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 GLP1RP43220 463 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 EMP3P54852 163 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 SCRN3Q0VDG4 424 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 EBPQ15125 230 aaKnown RBP12.47□□□□□ -0.41
DDX54-202ENST00000314045 PAQR6Q6TCH4 344 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 ABHD4Q8TB40 342 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 TSSK2Q96PF2 358 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 ZNF639Q9UID6 485 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 DNAJC13O75165 2243 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 A0A1W2PR77 199 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 DISC1C4P0D8 188 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 MPIG6BO95866 241 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 CD3GP09693 182 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 ABOP16442 354 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 TNFSF8P32971 234 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 ETV5P41161 510 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 ETV1P50549 477 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 PSG6Q00889 435 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 DUSP2Q05923 314 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 PYHIN1Q6K0P9 492 aa12.47□□□□□ -0.41
DDX54-202ENST00000314045 LIX1LQ8IVB5 337 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms