RNA–Protein interactions for RNA: ENST00000312989.11

PPP1CA-201, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene PPP1CA, Length 1,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-201ENST00000312989 PIAS4Q8N2W9 510 aaPredicted RBP12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 PFN4Q8NHR9 129 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 ZNF75AQ96N20 296 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 ASPNQ9BXN1 380 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 FKRPQ9H9S5 495 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 C20orf141Q9NUB4 165 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 ZNF224Q9NZL3 707 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 ABCD2Q9UBJ2 740 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 A4GNTQ9UNA3 340 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 MGAT4BQ9UQ53 548 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 NSD1Q96L73 2696 aaPredicted RBP12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 C2CD3Q4AC94 2353 aa12.72□□□□□ -0.37
PPP1CA-201ENST00000312989 A0A096LPE4 126 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 A0A1W2PPZ6 126 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 ELOVL7A1L3X0 281 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 SLC35F4A4IF30 521 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 ATP6V1G2-DDX39BF2Z307 99 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 H7C1Q1 480 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 KPNA4O00629 521 aaPredicted RBP12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 SNX3O60493 162 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 SLC43A1O75387 559 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 OR5F1O95221 314 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 CH25HO95992 272 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 IGHV4-39P01824 125 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 INHBBP09529 407 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 TTKP33981 857 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 SLC7A2P52569 658 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 SH3BGRP55822 239 aaPredicted RBP12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 LIPEQ05469 1076 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 KRTAP1-1Q07627 177 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 PMS2P3Q13401 168 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 CEACAM16Q2WEN9 425 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 LRRC23Q53EV4 343 aaPredicted RBP12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 ANKRD16Q6P6B7 361 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 KLHL17Q6TDP4 642 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 HACD2Q6Y1H2 254 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 ABHD12BQ7Z5M8 362 aaPredicted RBP12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 RNF217Q8TC41 542 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 SLC26A7Q8TE54 656 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 TMEM255BQ8WV15 326 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 DHRS9Q9BPW9 319 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 ELAC2Q9BQ52 826 aaKnown RBP12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 NOX3Q9HBY0 568 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 CRLF2Q9HC73 371 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 MAN2C1Q9NTJ4 1040 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 SELENONQ9NZV5 590 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 ZNF229Q9UJW7 825 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 GDF2Q9UK05 429 aaPredicted RBP12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 BAG5Q9UL15 447 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 NOX1Q9Y5S8 564 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 SNX13Q9Y5W8 968 aa12.71□□□□□ -0.37
PPP1CA-201ENST00000312989 ARID1AO14497 2285 aa12.71□□□□□ -0.38
PPP1CA-201ENST00000312989 DNHD1Q96M86 4753 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 FFAR1O14842 300 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 CCDC22O60826 627 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 SEC14L2O76054 403 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 PRSS23O95084 383 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 IGF2P01344 180 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 CELA3BP08861 270 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 NQO1P15559 274 aaKnown RBP12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 LSP1P33241 339 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 GSK3BP49841 420 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 GYS2P54840 703 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 ATP5J2P56134 94 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 SELENOWP63302 87 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 C1DQ13901 141 aaKnown RBP12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 MST1LQ2TV78 715 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 TTC33Q6PID6 262 aaPredicted RBP12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 SLC22A25Q6T423 547 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 VTCN1Q7Z7D3 282 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 FAM169BQ8N8A8 192 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 PIK3C3Q8NEB9 887 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 LIPHQ8WWY8 451 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 PROX1Q92786 737 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 LRR1Q96L50 414 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 SEPHS2Q99611 448 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 POLR2J2Q9GZM3 115 aaKnown RBP12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 POLR2J3Q9H1A7 115 aaKnown RBP12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 B3GNT2Q9NY97 397 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 RIMS3Q9UJD0 308 aa12.7□□□□□ -0.38
PPP1CA-201ENST00000312989 ZNF99A8MXY4 864 aaPredicted RBP12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 M0R3G1 203 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 MT-ND1P03886 318 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 CECR9P0C854 216 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 HOXB1P14653 301 aaPredicted RBP12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 IFNGR1P15260 489 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 CALCRP30988 508 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 RBM34P42696 430 aaKnown RBP12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 CAMK2DQ13557 499 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 FHL1Q13642 323 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 C3orf36Q3SXR2 165 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 CARD17Q5XLA6 110 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 HMBOX1Q6NT76 420 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 DEF8Q6ZN54 512 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 ARPINQ7Z6K5 226 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 BIVMQ86UB2 503 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 TMEM54Q969K7 222 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 POM121Q96HA1 1249 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 SLC38A2Q96QD8 506 aa12.69□□□□□ -0.38
PPP1CA-201ENST00000312989 MOKQ9UQ07 419 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms