RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 TENM4Q6N022 2769 aa15.87■□□□□ 0.13
SSSCA1-201ENST00000309328 MCIDASD6RGH6 385 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 C11orf98E9PRG8 122 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 CDC42EP2O14613 210 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 BCL10O95999 233 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 HPRP00739 348 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 IGHMP01871 453 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 APEHP13798 732 aaKnown RBP15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 AQP2P41181 271 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 CLDN17P56750 224 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 LSM11P83369 360 aaKnown RBP eCLIP15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 C1QTNF12Q5T7M4 302 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 SMARCD3Q6STE5 483 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 SLC35D2Q76EJ3 337 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 NUFIP2Q7Z417 695 aaKnown RBP15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 ZDHHC13Q8IUH4 622 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 KDM8Q8N371 416 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 CLDN22Q8N7P3 220 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 OR13C2Q8NGS9 318 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 OR51A7Q8NH64 312 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 OR5K1Q8NHB7 308 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 FANK1Q8TC84 345 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 FNDC8Q8TC99 324 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 ZNF385AQ96PM9 386 aaKnown RBP15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 OR10A4Q9H209 315 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 TXNIPQ9H3M7 391 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 B3GAT2Q9NPZ5 323 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 PDP1Q9P0J1 537 aaPredicted RBP15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 UPB1Q9UBR1 384 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 ENOPH1Q9UHY7 261 aa15.86■□□□□ 0.13
SSSCA1-201ENST00000309328 COL12A1Q99715 3063 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 TRAV27A0A087WT01 109 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 A6NIZ1 184 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 ENTPD5O75356 428 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 PTP4A3O75365 173 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 KRT33AO76009 404 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 ZNF432O94892 652 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 CD14P08571 375 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 IFNGR1P15260 489 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 RPL4P36578 427 aaKnown RBP15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 CD79BP40259 229 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 RAP1BP61224 184 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 RAP1AP62834 184 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 TGFBR3Q03167 851 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 TFF3Q07654 80 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 STK11Q15831 433 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 GPR139Q6DWJ6 353 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 DPY19L2P2Q6ZN68 376 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 RASSF6Q6ZTQ3 369 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 LUZP2Q86TE4 346 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 ZNF610Q8N9Z0 462 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 OR9Q2Q8NGE9 314 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 OR52L1Q8NGH7 329 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 SLC25A44Q96H78 314 aaPredicted RBP15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 TNFRSF13CQ96RJ3 184 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 OPN3Q9H1Y3 402 aaPredicted RBP15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 MCCC2Q9HCC0 563 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 S100A14Q9HCY8 104 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 ASB6Q9NWX5 421 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 VNN3Q9NY84 501 aa15.85■□□□□ 0.13
SSSCA1-201ENST00000309328 G3V2T6 193 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 AHCYL1O43865 530 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 GASTP01350 101 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 IGHG1P01857 330 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 POU2F1P14859 743 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 PPP3CBP16298 524 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 PSMB1P20618 241 aaKnown RBP15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 SLC6A6P31641 620 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 RPS6KA3P51812 740 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 SH3BGRP55822 239 aaPredicted RBP15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 NIPAL3Q6P499 406 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 NHLRC1Q6VVB1 395 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 ZNF620Q6ZNG0 422 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 UBE2J2Q8N2K1 259 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 GPR137CQ8N3F9 429 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 LRTOMTQ8WZ04 291 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 ZNF566Q969W8 418 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 ZNF775Q96BV0 537 aaPredicted RBP15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 OR2M2Q96R28 347 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 FEVQ99581 238 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 POLDIP3Q9BY77 421 aaKnown RBP15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 UCK2Q9BZX2 261 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 NTN4Q9HB63 628 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 KIF17Q9P2E2 1029 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 CDH10Q9Y6N8 788 aa15.84■□□□□ 0.13
SSSCA1-201ENST00000309328 MPDZO75970 2070 aa15.83■□□□□ 0.13
SSSCA1-201ENST00000309328 MED12LQ86YW9 2145 aa15.83■□□□□ 0.13
SSSCA1-201ENST00000309328 PCNX1Q96RV3 2341 aa15.83■□□□□ 0.12
SSSCA1-201ENST00000309328 SLC35F4A4IF30 521 aa15.83■□□□□ 0.12
SSSCA1-201ENST00000309328 NKX2-6A6NCS4 301 aa15.83■□□□□ 0.12
SSSCA1-201ENST00000309328 ZNF587BE7ETH6 402 aa15.83■□□□□ 0.12
SSSCA1-201ENST00000309328 IMPA2O14732 288 aa15.83■□□□□ 0.12
SSSCA1-201ENST00000309328 IDH3BO43837 385 aa15.83■□□□□ 0.12
SSSCA1-201ENST00000309328 SERPINI2O75830 405 aa15.83■□□□□ 0.12
SSSCA1-201ENST00000309328 F13BP05160 661 aa15.83■□□□□ 0.12
SSSCA1-201ENST00000309328 HLA-DOBP13765 273 aa15.83■□□□□ 0.12
SSSCA1-201ENST00000309328 ZNF23P17027 643 aa15.83■□□□□ 0.12
SSSCA1-201ENST00000309328 SELENOPP49908 381 aa15.83■□□□□ 0.12
SSSCA1-201ENST00000309328 CTXN1P60606 82 aa15.83■□□□□ 0.12
SSSCA1-201ENST00000309328 RPL27P61353 136 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms