RNA–Protein interactions for RNA: ENST00000309033.4

UBXN2A-201, Transcript of UBX domain protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN2A, Length 6,066 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-201ENST00000309033 RTL6Q6ICC9 239 aa17.15■□□□□ 0.34
UBXN2A-201ENST00000309033 MICU1Q9BPX6 476 aa17.15■□□□□ 0.34
UBXN2A-201ENST00000309033 SAGE1Q9NXZ1 904 aa17.15■□□□□ 0.34
UBXN2A-201ENST00000309033 SLX4Q8IY92 1834 aa17.15■□□□□ 0.34
UBXN2A-201ENST00000309033 AFMIDQ63HM1 303 aa17.14■□□□□ 0.34
UBXN2A-201ENST00000309033 MISPQ8IVT2 679 aa17.14■□□□□ 0.34
UBXN2A-201ENST00000309033 PLPP7Q8NBV4 271 aa17.14■□□□□ 0.34
UBXN2A-201ENST00000309033 FGGYQ96C11 551 aa17.14■□□□□ 0.34
UBXN2A-201ENST00000309033 PDFQ9HBH1 243 aa17.14■□□□□ 0.34
UBXN2A-201ENST00000309033 DDX60LQ5H9U9 1706 aaKnown RBP17.14■□□□□ 0.34
UBXN2A-201ENST00000309033 ICAM2P13598 275 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 ALKAL2Q6UX46 152 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 LIN7BQ9HAP6 207 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 SPHK1Q9NYA1 384 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 PEX14O75381 377 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 TK1P04183 234 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 ITGB2P05107 769 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 CCR6P51684 374 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 OR56B1Q8NGI3 324 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 TWSG1Q9GZX9 223 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 UBQLN3Q9H347 655 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 DYNLRB1Q9NP97 96 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 TRAPPC2LQ9UL33 140 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 M0QYG6 137 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 ADPRMQ3LIE5 342 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 MCOLN1Q9GZU1 580 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 FKRPQ9H9S5 495 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 RAB9BQ9NP90 201 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 TRPM3Q9HCF6 1732 aaPredicted RBP17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 MED6O75586 246 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 BLVRBP30043 206 aaPredicted RBP17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 HCCSP53701 268 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 SOWAHCQ53LP3 525 aaPredicted RBP17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 SLX4IPQ5VYV7 408 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 HAS2Q92819 552 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 MRPL38Q96DV4 380 aaKnown RBP17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 GIMAP5Q96F15 307 aa17.14■□□□□ 0.33
UBXN2A-201ENST00000309033 A0A0B4J2A0 478 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 MFAP5Q13361 173 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 ZNF385BQ569K4 471 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 ZNF578Q96N58 590 aaPredicted RBP17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 NMNAT2Q9BZQ4 307 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 TNFRSF12AQ9NP84 129 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 SHPKQ9UHJ6 478 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 HMGN4O00479 90 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 IFNA10P01566 189 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 ENPP1P22413 925 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 OMGP23515 440 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 GPLD1P80108 840 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 PYCR3Q53H96 274 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 SIAH3Q8IW03 269 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 SUMF2Q8NBJ7 301 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 OR56B4Q8NH76 319 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 RNF167Q9H6Y7 350 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 ASIC5Q9NY37 505 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 ITGB4P16144 1822 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 PMP2P02689 132 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 SNRNP70P08621 437 aaKnown RBP17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 TRIM61Q5EBN2 209 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 SAXO2Q658L1 398 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 POC1BQ8TC44 478 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 PPA2Q9H2U2 334 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 ANKRD19PQ9H560 264 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 OR2A25A4D2G3 310 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 CD1CP29017 333 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 AADACL3Q5VUY0 350 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 SGPP1Q9BX95 441 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 C11orf54Q9H0W9 315 aaPredicted RBP17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 TIMM8AO60220 97 aaPredicted RBP17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 MZT1Q08AG7 82 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 HNF4GQ14541 408 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 KCNJ8Q15842 424 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 DCXRQ7Z4W1 244 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 PIGTQ969N2 578 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 MBOAT4Q96T53 435 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 CDCP1Q9H5V8 836 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 HS3ST3A1Q9Y663 406 aa17.13■□□□□ 0.33
UBXN2A-201ENST00000309033 A0A1W2PR48 441 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 OR5K3A6NET4 321 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 DDAH2O95865 285 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 KCTD12Q96CX2 325 aaKnown RBP17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 POM121BA6NF01 834 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 HOXC11O43248 304 aaPredicted RBP17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 TUSC2O75896 110 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 NXPH3O95157 252 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 CRYZL1O95825 349 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 GABREP78334 506 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 DCLRE1CQ96SD1 692 aaKnown RBP17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 SLC25A31Q9H0C2 315 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 FADS1O60427 444 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 AKR7A3O95154 331 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 SHHQ15465 462 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 HSF5Q4G112 596 aaPredicted RBP17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 OR52W1Q6IF63 320 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 VASH1Q7L8A9 365 aaPredicted RBP17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 SECTM1Q8WVN6 248 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 Q96M85 177 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 DCBLD2Q96PD2 775 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 MMACHCQ9Y4U1 282 aa17.12■□□□□ 0.33
UBXN2A-201ENST00000309033 UBBP0CG47 229 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms