RNA–Protein interactions for RNA: ENST00000306641.1

CSPG4P1Y-201, Transcript of CSPG4 pseudogene 1 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P1Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P1Y-201ENST00000306641 ALG10Q5BKT4 473 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CARD17Q5XLA6 110 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ANKRD34AQ69YU3 496 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 HMBOX1Q6NT76 420 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 PGM2L1Q6PCE3 622 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 SLC35D2Q76EJ3 337 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 PIWIL3Q7Z3Z3 882 aaKnown RBP9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TSEN54Q7Z6J9 526 aaKnown RBP9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OAFQ86UD1 273 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ZIC4Q8N9L1 334 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OR4K5Q8NGD3 323 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 LIPHQ8WWY8 451 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 S100PBPQ96BU1 408 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 FAM46AQ96IP4 442 aaKnown RBP9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ADAD1Q96M93 576 aaKnown RBP9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 LINC00470Q9BZP3 86 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 REEP1Q9H902 201 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 INIPQ9NRY2 104 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 SLC7A10Q9NS82 523 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 MED29Q9NX70 200 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TAS2R5Q9NYW4 299 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 STX18Q9P2W9 335 aaKnown RBP9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 SLC7A8Q9UHI5 535 aa9.71□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TRAV27A0A087WT01 109 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 SH3PXD2BA1X283 911 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 SLC35F4A4IF30 521 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TNFRSF11BO00300 401 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 GNGT2O14610 69 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CLOCKO15516 846 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 BCL10O95999 233 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 F13BP05160 661 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 HLA-DOBP13765 273 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 IFNGR1P15260 489 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 MAKP20794 623 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 MPGP29372 298 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 NTF4P34130 210 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 AQP2P41181 271 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 PRPS1P60891 318 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CAMK2DQ13557 499 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 MELKQ14680 651 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TSC22D1Q15714 1073 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 C9orf135Q5VTT2 229 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 C1orf146Q5VVC0 180 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OR2T5Q6IEZ7 315 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OR7E24Q6IFN5 339 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ALKBH2Q6NS38 261 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TBPL2Q6SJ96 375 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 KLHL24Q6TFL4 600 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 SSX8Q7RTT4 187 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ZNF433Q8N7K0 673 aaPredicted RBP9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OR13C2Q8NGS9 318 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OR6N1Q8NGY5 312 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OR2T29Q8NH02 315 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OR51A7Q8NH64 312 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 MUCL1Q96DR8 90 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 WFIKKN1Q96NZ8 548 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ALPK1Q96QP1 1244 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OR2M2Q96R28 347 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 EMC6Q9BV81 110 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 NGBQ9NPG2 151 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 HIF3AQ9Y2N7 669 aa9.7□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 A6NNC1 897 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 UPK3AO75631 287 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CCNB2O95067 398 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CST1P01037 141 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 IGHG1P01857 330 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ITGA5P08648 1049 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 NR2C1P13056 603 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CDH2P19022 906 aaPredicted RBP9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 FUT4P22083 530 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 RPL4P36578 427 aaKnown RBP9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CSNK1A1P48729 337 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 SH3BGRP55822 239 aaPredicted RBP9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CLRN1P58418 232 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 LSM11P83369 360 aaKnown RBP eCLIP9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ROR2Q01974 943 aaKnown RBP9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TOP3AQ13472 1001 aaPredicted RBP9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 GK3PQ14409 553 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ZBED5Q49AG3 693 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 IQCCQ4KMZ1 466 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TIMM23BQ5SRD1 257 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TMPRSS11FQ6ZWK6 438 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 P2RY8Q86VZ1 359 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 MEX3DQ86XN8 651 aaKnown RBP9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 WFDC8Q8IUA0 241 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ADGRG5Q8IZF4 528 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 TMEM123Q8N131 208 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 C17orf78Q8N4C9 275 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 LINC00471Q8N535 108 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 C1orf162Q8NEQ5 155 aaPredicted RBP9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 OR6X1Q8NH79 312 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CANT1Q8WVQ1 401 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 HSD17B8Q92506 261 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ZNF566Q969W8 418 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 LRR1Q96L50 414 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 CHID1Q9BWS9 393 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 POLDIP3Q9BY77 421 aaKnown RBP9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 ULBP2Q9BZM5 246 aa9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 SAMHD1Q9Y3Z3 626 aaKnown RBP9.69□□□□□ -0.86
CSPG4P1Y-201ENST00000306641 LYVE1Q9Y5Y7 322 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms