RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 PHYHIPQ92561 330 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 OR52A5Q9H2C5 316 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 MAP1BP46821 2468 aaKnown RBP14.7□□□□□ -0.06
USP42-201ENST00000306177 TNFRSF10AO00220 468 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 TK1P04183 234 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 RPL23AP62750 156 aaKnown RBP14.7□□□□□ -0.06
USP42-201ENST00000306177 USF2Q15853 346 aaPredicted RBP14.7□□□□□ -0.06
USP42-201ENST00000306177 GRINAQ7Z429 371 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 RBM45Q8IUH3 476 aaKnown RBP14.7□□□□□ -0.06
USP42-201ENST00000306177 MUCL1Q96DR8 90 aa14.7□□□□□ -0.06
USP42-201ENST00000306177 F8W036 122 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 I6L893 689 aaPredicted RBP14.69□□□□□ -0.06
USP42-201ENST00000306177 FZD6O60353 706 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 GLCEO94923 617 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 THBS1P07996 1170 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 UBCP0CG48 685 aaKnown RBP14.69□□□□□ -0.06
USP42-201ENST00000306177 NID1P14543 1247 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 JUNBP17275 347 aaPredicted RBP14.69□□□□□ -0.06
USP42-201ENST00000306177 ETV6P41212 452 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 SLC19A1P41440 591 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 BLOC1S1P78537 153 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 RBPJQ06330 500 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 ZNF845Q96IR2 970 aaPredicted RBP14.69□□□□□ -0.06
USP42-201ENST00000306177 CNTNAP3BQ96NU0 1288 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 PKMYT1Q99640 499 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 TRDV1A0A1B0GX56 115 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 UBL3O95164 117 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 CYHR1Q6ZMK1 362 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 MIB2Q96AX9 1013 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 ZNF681Q96N22 645 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 KCND3Q9UK17 655 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 EMC9Q9Y3B6 208 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 THSD7AQ9UPZ6 1657 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 ITGB2P05107 769 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 GDNFP39905 211 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 ETV5P41161 510 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 CCR5P51681 352 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 MEP1BQ16820 701 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 NRARPQ7Z6K4 114 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 ZNF511Q8NB15 262 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 BEST4Q8NFU0 473 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 KCNG3Q8TAE7 436 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 GIMAP1Q8WWP7 306 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 OR14A2Q96R54 314 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 SDF2Q99470 211 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 ELF4Q99607 663 aaPredicted RBP14.69□□□□□ -0.06
USP42-201ENST00000306177 ACKR4Q9NPB9 350 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 ACER3Q9NUN7 267 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 OR2A25A4D2G3 310 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 D6RAR5 112 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 TMPRSS11DO60235 418 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 GABREP78334 506 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 PFN4Q8NHR9 129 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 RASD2Q96D21 266 aa14.69□□□□□ -0.06
USP42-201ENST00000306177 OR7C1O76099 320 aaPredicted RBP14.68□□□□□ -0.06
USP42-201ENST00000306177 ZNF585AQ6P3V2 769 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 LINC00346Q8IVM7 164 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 NKAIN4Q8IVV8 208 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 ZNF679Q8IYX0 411 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 OR56B2PQ8NGI1 322 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 BAHD1Q8TBE0 780 aaPredicted RBP14.68□□□□□ -0.06
USP42-201ENST00000306177 RAB3CQ96E17 227 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 PSD2Q9BQI7 771 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 UBE2ZQ9H832 354 aaPredicted RBP14.68□□□□□ -0.06
USP42-201ENST00000306177 LRFN1Q9P244 771 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 ZNF223Q9UK11 482 aaPredicted RBP14.68□□□□□ -0.06
USP42-201ENST00000306177 ZNF195O14628 629 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 PEX14O75381 377 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 BCL2A1Q16548 175 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 C9orf50Q5SZB4 431 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 PM20D2Q8IYS1 436 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 ZNF610Q8N9Z0 462 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 NRSN2Q9GZP1 204 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 MRPS28Q9Y2Q9 187 aaKnown RBP14.68□□□□□ -0.06
USP42-201ENST00000306177 ABCA3Q99758 1704 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 NUP205Q92621 2012 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 ARL3P36405 182 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 SLC35A4Q96G79 324 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 WASH6PQ9NQA3 447 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 SLC25A37Q9NYZ2 338 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 TMEM82A0PJX8 343 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 PLRG1O43660 514 aaKnown RBP14.68□□□□□ -0.06
USP42-201ENST00000306177 IL2RGP31785 369 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 RAP2BP61225 183 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 NKAIN1Q4KMZ8 207 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 ZNF385BQ569K4 471 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 SPNS2Q8IVW8 549 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 OR6V1Q8N148 313 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 RAB39BQ96DA2 213 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 TWSG1Q9GZX9 223 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 GLTPQ9NZD2 209 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 OSGIN1Q9UJX0 560 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 ETV7Q9Y603 341 aa14.68□□□□□ -0.06
USP42-201ENST00000306177 PSMB1P20618 241 aaKnown RBP14.67□□□□□ -0.06
USP42-201ENST00000306177 LIPAP38571 399 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 SLC22A24Q8N4F4 322 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 RBFOX1Q9NWB1 397 aaKnown RBP14.67□□□□□ -0.06
USP42-201ENST00000306177 PRAMEF27A3QJZ7 478 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 P2RY10O00398 339 aa14.67□□□□□ -0.06
USP42-201ENST00000306177 CBX7O95931 251 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms