RNA–Protein interactions for RNA: ENST00000303395.8

SCN1A-201, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN1A, Length 8,533 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-201ENST00000303395 GPR83Q9NYM4 423 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 RPH3ALQ9UNE2 315 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 DLGAP4Q9Y2H0 992 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 KCTD3Q9Y597 815 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 B3GALT1Q9Y5Z6 326 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 KCNAB3O43448 404 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 SELPP16109 830 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 HMGA1P17096 107 aaKnown RBP4.88□□□□□ -1.63
SCN1A-201ENST00000303395 CD1BP29016 333 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 CORO1AP31146 461 aaKnown RBP4.88□□□□□ -1.63
SCN1A-201ENST00000303395 TAF10Q12962 218 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 UPP1Q16831 310 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 ADPRMQ3LIE5 342 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 BCL7AQ4VC05 210 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 DPPA4Q7L190 304 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 KLBQ86Z14 1044 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 GPR137CQ8N3F9 429 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 SUMF2Q8NBJ7 301 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 OR1F2PQ96R84 312 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 CHODLQ9H9P2 273 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 AJAP1Q9UKB5 411 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-201ENST00000303395 GLTPD2A6NH11 291 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 ADAM11O75078 769 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 VAMP5O95183 116 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 PTHP01270 115 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 SLC6A1P30531 599 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 TNFSF9P41273 254 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 ARRB1P49407 418 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-201ENST00000303395 DGKEP52429 567 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 TUSC1Q2TAM9 212 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 OR4D6Q8NGJ1 314 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 NFKBIDQ8NI38 313 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 ASB11Q8WXH4 323 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 ST8SIA4Q92187 359 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 FGF14Q92915 247 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 NUS1Q96E22 293 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 CLSTN3Q9BQT9 956 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 NICN1Q9BSH3 213 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 HES7Q9BYE0 225 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 EXOSC3Q9NQT5 275 aaKnown RBP4.88□□□□□ -1.63
SCN1A-201ENST00000303395 UTS2RQ9UKP6 389 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 TRBV2A0A0J9YWF9 115 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 A0A1B0GTW7 788 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 CST3P01034 146 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-201ENST00000303395 POU2F1P14859 743 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 DTYMKP23919 212 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 NPY4RP50391 375 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 CST9LP1Q5W188 147 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 C8orf82Q6P1X6 216 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-201ENST00000303395 OTOP3Q7RTS5 596 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 SSX8Q7RTT4 187 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 OR9I1Q8NGQ6 314 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 CPNE4Q96A23 557 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-201ENST00000303395 PLK3Q9H4B4 646 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 SLC2A6Q9UGQ3 507 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 DAOP14920 347 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 SDC1P18827 310 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 RAB6AP20340 208 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 CNR2P34972 360 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 AFMIDQ63HM1 303 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 C22orf42Q6IC83 251 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 ZNF546Q86UE3 836 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 ZBTB46Q86UZ6 589 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 CLIP4Q8N3C7 705 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 TMEM151AQ8N4L1 468 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 CERS5Q8N5B7 392 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 TMEM185AQ8NFB2 350 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 OR52J3Q8NH60 311 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 ST8SIA2Q92186 375 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 DAZLQ92904 295 aaKnown RBP4.88□□□□□ -1.63
SCN1A-201ENST00000303395 PSMG2Q969U7 264 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 MIB2Q96AX9 1013 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 CIB3Q96Q77 187 aaPredicted RBP4.88□□□□□ -1.63
SCN1A-201ENST00000303395 MMP26Q9NRE1 261 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 GPR173Q9NS66 373 aa4.88□□□□□ -1.63
SCN1A-201ENST00000303395 DCDC2BA2VCK2 349 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 TARM1B6A8C7 271 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 SERPINE2P07093 398 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 ZNF44P15621 663 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 SERPINA2P20848 420 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 GATMP50440 423 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 LBX1P52954 281 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 SUMO3P55854 103 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-201ENST00000303395 MAXP61244 160 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 CXCL9Q07325 125 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 PLPP4Q5VZY2 271 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 LSRQ86X29 649 aaPredicted RBP4.87□□□□□ -1.63
SCN1A-201ENST00000303395 SIDT2Q8NBJ9 832 aaKnown RBP4.87□□□□□ -1.63
SCN1A-201ENST00000303395 C3orf58Q8NDZ4 430 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 OR2D3Q8NGH3 330 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 OR5D14Q8NGL3 314 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 OR10K1Q8NGX5 313 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 BLNKQ8WV28 456 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 UCN3Q969E3 161 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 PGAM5Q96HS1 289 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 WFIKKN1Q96NZ8 548 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 DPH1Q9BZG8 443 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 OR2J1Q9GZK6 312 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 ERVMER34-1Q9H9K5 563 aa4.87□□□□□ -1.63
SCN1A-201ENST00000303395 GALNT9Q9HCQ5 603 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms