RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 PRSS45Q7RTY3 260 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 ST8SIA4Q92187 359 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 PRRC1Q96M27 445 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 SHARPINQ9H0F6 387 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 RGPD5Q99666 1765 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 ARPC5O15511 151 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 GABRG2P18507 467 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 COL9A1P20849 921 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 DNASE1P24855 282 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 BDKRB2P30411 391 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 TESK1Q15569 626 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 BTLAQ7Z6A9 289 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 CHCHD4Q8N4Q1 142 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 LMF2Q9BU23 707 aaKnown RBP7.18□□□□□ -1.26
SCN9A-201ENST00000303354 MED29Q9NX70 200 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 TUBA3CQ13748 450 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 DUSP5Q16690 384 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 B3GNTL1Q67FW5 361 aaPredicted RBP7.18□□□□□ -1.26
SCN9A-201ENST00000303354 TUBA3EQ6PEY2 450 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 CAMKMTQ7Z624 323 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 SULF2Q8IWU5 870 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 METTL4Q8N3J2 472 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 HPSE2Q8WWQ2 592 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 UCN3Q969E3 161 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 HINT3Q9NQE9 182 aaKnown RBP7.18□□□□□ -1.26
SCN9A-201ENST00000303354 TREX1Q9NSU2 369 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 GNG13Q9P2W3 67 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 CTSFQ9UBX1 484 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 SERGEFQ9UGK8 458 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 ING1Q9UK53 422 aaPredicted RBP7.18□□□□□ -1.26
SCN9A-201ENST00000303354 RASD1Q9Y272 281 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 V9GY05 133 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 IGKV3-7A0A075B6H7 116 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 WASH4PA8MWX3 477 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 PPIHO43447 177 aaKnown RBP7.18□□□□□ -1.26
SCN9A-201ENST00000303354 GLRA1P23415 457 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 NPBWR1P48145 328 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 HTD2P86397 168 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 SLC38A5Q8WUX1 472 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 TIMD4Q96H15 378 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 BOD1Q96IK1 185 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 MRPS28Q9Y2Q9 187 aaKnown RBP7.18□□□□□ -1.26
SCN9A-201ENST00000303354 M0QYG6 137 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 FECHP22830 423 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 MZT1Q08AG7 82 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 PLEKHN1Q494U1 663 aaPredicted RBP7.18□□□□□ -1.26
SCN9A-201ENST00000303354 RNLSQ5VYX0 342 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 TCTN3Q6NUS6 607 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 ADGRF3Q8IZF5 1079 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 OCSTAMPQ9BR26 566 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 A0A1B0GWA3 101 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 SLC5A10A0PJK1 596 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 SOBPA7XYQ1 873 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 POM121CA8CG34 1229 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 FANCGO15287 622 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 ADAM23O75077 832 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 EMDP50402 254 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 SLC35A2P78381 396 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 EXT1Q16394 746 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 C20orf27Q9GZN8 174 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 TMEM45AQ9NWC5 275 aa7.18□□□□□ -1.26
SCN9A-201ENST00000303354 A0A1W2PPC4 97 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 BLACEA4D250 179 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 CDHR4A6H8M9 788 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 SBK2P0C263 348 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF14P17017 642 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-201ENST00000303354 LYPD8Q6UX82 237 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 PAPD5Q8NDF8 572 aaKnown RBP7.17□□□□□ -1.26
SCN9A-201ENST00000303354 OR51H1Q8NH63 302 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 HAS2Q92819 552 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 GNRHR2Q96P88 292 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 PPM1DO15297 605 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 OR10J4P0C629 311 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 GAAP10253 952 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 MMP12P39900 470 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 TRAM1Q15629 374 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 MPP7Q5T2T1 576 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 BCORP1Q8N888 145 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 AKR7LQ8NHP1 331 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 HS3ST2Q9Y278 367 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 A6NHS1 94 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 ZNF487B1APH4 448 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 CLDN1O95832 211 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 NPPBP16860 134 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 SHC1P29353 583 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 SSTR2P30874 369 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 PTGS2P35354 604 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 CDK5R2Q13319 367 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 CNIH2Q6PI25 160 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 ADAMTSL4Q6UY14 1074 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 NKAIN4Q8IVV8 208 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 C15orf40Q8WUR7 153 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 C11orf40Q8WZ69 217 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 DAZAP1Q96EP5 407 aaKnown RBP7.17□□□□□ -1.26
SCN9A-201ENST00000303354 AMDHD1Q96NU7 426 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 OR5M11Q96RB7 305 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 LRRC61Q9BV99 259 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 SERTM2A0A1B0GWG4 89 aa7.17□□□□□ -1.26
SCN9A-201ENST00000303354 SRRM3A6NNA2 597 aaPredicted RBP7.17□□□□□ -1.26
SCN9A-201ENST00000303354 H3BMH7 237 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms