RNA–Protein interactions for RNA: ENST00000297979.9

C9orf3-202, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 1 (best) BASIC

Gene C9orf3, Length 2,820 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-202ENST00000297979 SNTA1Q13424 505 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 GALEQ14376 348 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 PON3Q15166 354 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 SLC35D3Q5M8T2 416 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 PIP4P1Q86T03 277 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 RPS19BP1Q86WX3 136 aaKnown RBP12.89□□□□□ -0.35
C9orf3-202ENST00000297979 DND1Q8IYX4 353 aaKnown RBP12.89□□□□□ -0.35
C9orf3-202ENST00000297979 GHDCQ8N2G8 530 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 ZMYND19Q96E35 227 aaPredicted RBP12.89□□□□□ -0.35
C9orf3-202ENST00000297979 TSPAN32Q96QS1 320 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 SLIRPQ9GZT3 109 aaKnown RBP12.89□□□□□ -0.35
C9orf3-202ENST00000297979 ASB6Q9NWX5 421 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 TAS2R5Q9NYW4 299 aa12.89□□□□□ -0.35
C9orf3-202ENST00000297979 LRP3O75074 770 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 SPI1P17947 270 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 CDKN2AP42771 156 aaKnown RBP12.88□□□□□ -0.35
C9orf3-202ENST00000297979 MLF1P58340 268 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 KRR1Q13601 381 aaKnown RBP12.88□□□□□ -0.35
C9orf3-202ENST00000297979 IL10RAQ13651 578 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 PLPPR5Q32ZL2 321 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 GPR139Q6DWJ6 353 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 TMEM81Q6P7N7 255 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 ARMC10Q8N2F6 343 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 POMGNT2Q8NAT1 580 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 OR2M3Q8NG83 312 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 OR6S1Q8NH40 331 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 MRGPRX4Q96LA9 322 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 CNN2Q99439 309 aaKnown RBP12.88□□□□□ -0.35
C9orf3-202ENST00000297979 SSR3Q9UNL2 185 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 PMF1-BGLAPU3KQ54 211 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 PNMA8CA0A1B0GUJ8 204 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 MASP2O00187 686 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 ZNF208O43345 1280 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 LALBAP00709 142 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 INHBBP09529 407 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 GRPRP30550 384 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 SLC25A1P53007 311 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 DCTN2Q13561 401 aaKnown RBP12.88□□□□□ -0.35
C9orf3-202ENST00000297979 DNASE1L3Q13609 305 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 SLC25A53Q5H9E4 307 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 PRAMEF20Q5VT98 475 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 LINC00299Q6ZSB3 139 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 GLRX5Q86SX6 157 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 OR51L1Q8NGJ5 315 aa12.88□□□□□ -0.35
C9orf3-202ENST00000297979 RYDENQ9NUL5 291 aaKnown RBP12.88□□□□□ -0.35
C9orf3-202ENST00000297979 DIO1P49895 249 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 MAP2K6P52564 334 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 SLC6A19Q695T7 634 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 TMEM156Q8N614 296 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 IL17RDQ8NFM7 739 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 NLGN4YQ8NFZ3 816 aaPredicted RBP12.87□□□□□ -0.35
C9orf3-202ENST00000297979 DDIT4LQ96D03 193 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 FRMD6Q96NE9 622 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 CCDC59Q9P031 241 aaKnown RBP12.87□□□□□ -0.35
C9orf3-202ENST00000297979 FTCDNL1E5RQL4 147 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 C11orf98E9PRG8 122 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 DXOO77932 396 aaKnown RBP12.87□□□□□ -0.35
C9orf3-202ENST00000297979 CRYZL1O95825 349 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 RPS25P62851 125 aaKnown RBP12.87□□□□□ -0.35
C9orf3-202ENST00000297979 BDH1Q02338 343 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 INPP5JQ15735 1006 aaPredicted RBP12.87□□□□□ -0.35
C9orf3-202ENST00000297979 MESTQ5EB52 335 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 KLBQ86Z14 1044 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 ZFP41Q8N8Y5 198 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 FADS6Q8N9I5 356 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 OR4K17Q8NGC6 315 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 TRMT61AQ96FX7 289 aaKnown RBP12.87□□□□□ -0.35
C9orf3-202ENST00000297979 TIMP4Q99727 224 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 GPR87Q9BY21 358 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 ISG20L2Q9H9L3 353 aaKnown RBP12.87□□□□□ -0.35
C9orf3-202ENST00000297979 RPRD1BQ9NQG5 326 aaKnown RBP12.87□□□□□ -0.35
C9orf3-202ENST00000297979 MRPL39Q9NYK5 338 aaKnown RBP12.87□□□□□ -0.35
C9orf3-202ENST00000297979 FBXL2Q9UKC9 423 aa12.87□□□□□ -0.35
C9orf3-202ENST00000297979 C21orf140B9A014 251 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 RNF13O43567 381 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 OR6A2O95222 327 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 GABRA5P31644 462 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 ZNF85Q03923 595 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 CHAF1BQ13112 559 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 MFSD13AQ14CX5 517 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 WDSUB1Q8N9V3 476 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 OR6K6Q8NGW6 343 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 ZNF417Q8TAU3 575 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 ZNRF4Q8WWF5 429 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 TMEM203Q969S6 136 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 ZNF587Q96SQ5 575 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-202ENST00000297979 PTGES2Q9H7Z7 377 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 PLGRKTQ9HBL7 147 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 HPF1Q9NWY4 346 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 P4HTMQ9NXG6 502 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 ZNF346Q9UL40 294 aaKnown RBP12.86□□□□□ -0.35
C9orf3-202ENST00000297979 SF3B6Q9Y3B4 125 aaKnown RBP12.86□□□□□ -0.35
C9orf3-202ENST00000297979 CACNA1HO95180 2353 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 A0A1W2PQL4 384 aaPredicted RBP12.86□□□□□ -0.35
C9orf3-202ENST00000297979 SHISA8B8ZZ34 492 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 SLC30A4O14863 429 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 MAGEB3O15480 346 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 GLCEO94923 617 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 SELLP14151 372 aa12.86□□□□□ -0.35
C9orf3-202ENST00000297979 AHCYP23526 432 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms