RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 HSMCR30P0CW71 290 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 CLUP10909 449 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 BMP4P12644 408 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 SDHAP31040 664 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 CDK10Q15131 360 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 ACER2Q5QJU3 275 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 B3GNTL1Q67FW5 361 aaPredicted RBP14.03□□□□□ -0.16
LSM6-201ENST00000296581 UTS2BQ765I0 119 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 DTX1Q86Y01 620 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 OR51G2Q8NGK0 314 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 TRIM63Q969Q1 353 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 SLC25A36Q96CQ1 311 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 RASD2Q96D21 266 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 IP6K3Q96PC2 410 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 POTEKPQ9BYX7 375 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 PTPRBP23467 1997 aa14.03□□□□□ -0.16
LSM6-201ENST00000296581 TEX13CA0A0J9YWL9 993 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 ERVH48-1M5A8F1 160 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 FZD7O75084 574 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 GRPRP30550 384 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 ATP6V1E1P36543 226 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 WNT4P56705 351 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 MLLT11Q13015 90 aaPredicted RBP14.02□□□□□ -0.16
LSM6-201ENST00000296581 TSTQ16762 297 aaKnown RBP14.02□□□□□ -0.16
LSM6-201ENST00000296581 GPR139Q6DWJ6 353 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 B3GLCTQ6Y288 498 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 GPALPP1Q8IXQ4 340 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 ZNF485Q8NCK3 441 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 MFSD8Q8NHS3 518 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 DDIT4LQ96D03 193 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 NMNAT3Q96T66 252 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 ERVK13-1Q9NX77 482 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 MRPL39Q9NYK5 338 aaKnown RBP14.02□□□□□ -0.16
LSM6-201ENST00000296581 SEC14L4Q9UDX3 406 aa14.02□□□□□ -0.16
LSM6-201ENST00000296581 A0A087WZY1 265 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 OR6C68A6NDL8 312 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 SHISA8B8ZZ34 492 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 GADD45AP24522 165 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 ADH6P28332 368 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 RBMS1P29558 406 aaKnown RBP14.02□□□□□ -0.17
LSM6-201ENST00000296581 RPS7P62081 194 aaKnown RBP14.02□□□□□ -0.17
LSM6-201ENST00000296581 MFSD13AQ14CX5 517 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 SSX1Q16384 188 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 ATCAYQ86WG3 371 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 OR9Q1Q8NGQ5 310 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 LILRB1Q8NHL6 650 aaPredicted RBP14.02□□□□□ -0.17
LSM6-201ENST00000296581 RPL3LQ92901 407 aaKnown RBP14.02□□□□□ -0.17
LSM6-201ENST00000296581 DNAJA3Q96EY1 480 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 TSPAN32Q96QS1 320 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 ASPNQ9BXN1 380 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 ADGRL4Q9HBW9 690 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 ISYNA1Q9NPH2 558 aa14.02□□□□□ -0.17
LSM6-201ENST00000296581 PROB1E7EW31 1015 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 CCNKO75909 580 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 SNX4O95219 450 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 GYPBP06028 91 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 CEACAM1P13688 526 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 IL11P20809 199 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 IL32P24001 234 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 EIF1P41567 113 aaKnown RBP14.01□□□□□ -0.17
LSM6-201ENST00000296581 CDKN2AP42771 156 aaKnown RBP14.01□□□□□ -0.17
LSM6-201ENST00000296581 DBPQ10586 325 aaPredicted RBP14.01□□□□□ -0.17
LSM6-201ENST00000296581 GGTLC2Q14390 218 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 OR2G6Q5TZ20 316 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 SLC6A19Q695T7 634 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 IGF2-ASQ6U949 168 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 IL22RA1Q8N6P7 574 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 ZPLD1Q8TCW7 415 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 ZBTB8AQ96BR9 441 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 TMEM41AQ96HV5 264 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 THOC3Q96J01 351 aaKnown RBP14.01□□□□□ -0.17
LSM6-201ENST00000296581 ARL5BQ96KC2 179 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 ASCL3Q9NQ33 180 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 INPP5EQ9NRR6 644 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 SERINC1Q9NRX5 453 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 PLPP3O14495 311 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 AIREO43918 545 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 SBK2P0C263 348 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 LIFP15018 202 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 PTGS2P35354 604 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 SLC25A1P53007 311 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 LGALS3BPQ08380 585 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 POU4F2Q12837 409 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 SLC35D3Q5M8T2 416 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 DCAF10Q5QP82 559 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 MDGA2Q7Z553 956 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 LHFPL3Q86UP9 236 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 JAZF1Q86VZ6 243 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 ACBD7Q8N6N7 88 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 OR52N1Q8NH53 320 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 ZNF417Q8TAU3 575 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 ZNF587Q96SQ5 575 aaPredicted RBP14.01□□□□□ -0.17
LSM6-201ENST00000296581 GRHPRQ9UBQ7 328 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 ZNF221Q9UK13 617 aa14.01□□□□□ -0.17
LSM6-201ENST00000296581 CFAP54Q96N23 3096 aa14□□□□□ -0.17
LSM6-201ENST00000296581 CD40LGP29965 261 aa14□□□□□ -0.17
LSM6-201ENST00000296581 SLC16A1P53985 500 aa14□□□□□ -0.17
LSM6-201ENST00000296581 MRPS15P82914 257 aaKnown RBP14□□□□□ -0.17
LSM6-201ENST00000296581 KRR1Q13601 381 aaKnown RBP14□□□□□ -0.17
LSM6-201ENST00000296581 MESTQ5EB52 335 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms