RNA–Protein interactions for RNA: ENST00000292478.8

PTCD1-201, Transcript of pentatricopeptide repeat domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCD1, Length 5,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-201ENST00000292478 OR7G2Q8NG99 324 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 PSMF1Q92530 271 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 FER1L6-AS2Q96M78 137 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 MBOAT4Q96T53 435 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 NUDT22Q9BRQ3 303 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 OR52A5Q9H2C5 316 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 PPA2Q9H2U2 334 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 LHX6Q9UPM6 363 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.8□□□□□ -0.52
PTCD1-201ENST00000292478 TCRBV5S2A0A599 114 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 TMEM221A6NGB7 291 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 IFNA10P01566 189 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 IFNA17P01571 189 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 SMIM18P0DKX4 95 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF44P15621 663 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 BIDP55957 195 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 MFGE8Q08431 387 aaPredicted RBP11.8□□□□□ -0.52
PTCD1-201ENST00000292478 C1orf140Q5VVS0 124 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 FCRL6Q6DN72 434 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 DPY19L4Q7Z388 723 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 EGFL6Q8IUX8 553 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 OR56B2PQ8NGI1 322 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 SLC37A2Q8TED4 501 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 ZIC5Q96T25 663 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 MYOTQ9UBF9 498 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 RAB22AQ9UL26 194 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 TP53TG5Q9Y2B4 290 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 MRPS28Q9Y2Q9 187 aaKnown RBP11.8□□□□□ -0.52
PTCD1-201ENST00000292478 PRAMEF25A6NGN4 478 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 K7ESM1 405 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 TOR1AO14656 332 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 PPP3CBP16298 524 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 LIPAP38571 399 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 PGFP49763 221 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 P2RX1P51575 399 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 IHHQ14623 411 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 DUSP5Q16690 384 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 ZMAT1Q5H9K5 638 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 PARM1Q6UWI2 310 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF546Q86UE3 836 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 SDF2Q99470 211 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 C1orf123Q9NWV4 160 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 TBX21Q9UL17 535 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 DOCK2Q92608 1830 aa11.8□□□□□ -0.52
PTCD1-201ENST00000292478 MYO18AQ92614 2054 aaKnown RBP11.8□□□□□ -0.52
PTCD1-201ENST00000292478 TAF1P21675 1872 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 DDAH2O95865 285 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 FCGR2AP12318 317 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 GLULP15104 373 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 RRAS2P62070 204 aaPredicted RBP11.79□□□□□ -0.52
PTCD1-201ENST00000292478 GABREP78334 506 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 GALEQ14376 348 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 LPAL2Q16609 132 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF750Q32MQ0 723 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 TMEM185AQ8NFB2 350 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 KCNJ16Q9NPI9 418 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 PAPPAQ13219 1627 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 A0A087WV62 115 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 A6NIN4 97 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 CD1CP29017 333 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 MTCP1P56278 107 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 H1FNTQ75WM6 255 aaPredicted RBP11.79□□□□□ -0.52
PTCD1-201ENST00000292478 FOXN4Q96NZ1 517 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 PFDN5Q99471 154 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 LIN7BQ9HAP6 207 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 MYO5AQ9Y4I1 1855 aaKnown RBP11.79□□□□□ -0.52
PTCD1-201ENST00000292478 LOC100289279A0A1B0GTE1 492 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 A0A1W2PR48 441 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 SURF4O15260 269 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 EN2P19622 333 aaPredicted RBP11.79□□□□□ -0.52
PTCD1-201ENST00000292478 MAKP20794 623 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 CHATP28329 748 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 SYT14P1Q58G82 188 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 PTCRAQ6ISU1 281 aaPredicted RBP11.79□□□□□ -0.52
PTCD1-201ENST00000292478 UPRTQ96BW1 309 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 EMC7Q9NPA0 242 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 NOSIPQ9Y314 301 aaKnown RBP11.79□□□□□ -0.52
PTCD1-201ENST00000292478 NSA2O95478 260 aaKnown RBP11.79□□□□□ -0.52
PTCD1-201ENST00000292478 TRAPPC2P0DI81 140 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 TRAPPC2BP0DI82 140 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 VEGFCP49767 419 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 ADPRMQ3LIE5 342 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 Q6ZNX1 250 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 IDO2Q6ZQW0 420 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 RIMKLAQ8IXN7 391 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 OR13C9Q8NGT0 318 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 BAHD1Q8TBE0 780 aaPredicted RBP11.79□□□□□ -0.52
PTCD1-201ENST00000292478 S100PBPQ96BU1 408 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 TAS2R16Q9NYV7 291 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 SLC25A37Q9NYZ2 338 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 DHCR7Q9UBM7 475 aaKnown RBP11.79□□□□□ -0.52
PTCD1-201ENST00000292478 TBC1D29Q9UFV1 150 aa11.79□□□□□ -0.52
PTCD1-201ENST00000292478 A6NL46 340 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 ZAR1LA6NP61 321 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 PIP5K1CO60331 668 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 RPL27P61353 136 aaKnown RBP11.78□□□□□ -0.52
PTCD1-201ENST00000292478 BDH1Q02338 343 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 RBPJQ06330 500 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 KRBOX4Q5JUW0 171 aa11.78□□□□□ -0.52
PTCD1-201ENST00000292478 ZNF529Q6P280 563 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms