RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 CCDC3Q9BQI4 270 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 CD93Q9NPY3 652 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 RWDD3Q9Y3V2 267 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 POM121CA8CG34 1229 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 SNRPGP15A8MWD9 76 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 C2orf74A8MZ97 194 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 SUSD5O60279 629 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 CTNSO60931 367 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 GLSO94925 669 aaPredicted RBP12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 MAS1P04201 325 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 IL5P05113 134 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 COL9A1P20849 921 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 IL10RAQ13651 578 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 ALKBH1Q13686 389 aaKnown RBP12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 CSRP2Q16527 193 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 SLC16A9Q7RTY1 509 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 LRRTM1Q86UE6 522 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 C10orf53Q8N6V4 93 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 OR5M1Q8NGP8 315 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 NSMAFQ92636 917 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 C3orf49Q96BT1 292 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 GINS4Q9BRT9 223 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 MRI1Q9BV20 369 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 SFXN1Q9H9B4 322 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 C12orf10Q9HB07 376 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 ING1Q9UK53 422 aaPredicted RBP12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 ETV7Q9Y603 341 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 KCNMB2Q9Y691 235 aa12.07□□□□□ -0.48
SLC28A1-201ENST00000286749 CACNA1CQ13936 2221 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 IGKV1D-42A0A075B6H8 117 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 TRAV8-7A0A075B6U6 113 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 EFCAB7A8K855 629 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 ARPC5O15511 151 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 FOXS1O43638 330 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 TACSTD2P09758 323 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 LTBQ06643 244 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 C2orf68Q2NKX9 166 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 PCGF3Q3KNV8 242 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 GATSQ8NAP1 163 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 OR8K3Q8NH51 312 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 COQ8AQ8NI60 647 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 BMFQ96LC9 184 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 HRASLS2Q9NWW9 162 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 PRELID1Q9Y255 219 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 MFSD2BA6NFX1 497 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 SERINC4A6NH21 518 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 TVP23AA6NH52 213 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 ANXA2P2A6NMY6 339 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 H0YC42 278 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 H7C1C5 153 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 TMEM127O75204 238 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 LDOC1O95751 146 aaPredicted RBP12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 PROS1P07225 676 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 ANXA2P07355 339 aaKnown RBP12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 HOXD4P09016 255 aaPredicted RBP12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 ZP3P21754 424 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 MAPK3P27361 379 aaPredicted RBP12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 MECP2P51608 486 aaKnown RBP12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 PRPS1P60891 318 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 UBE2MP61081 183 aaKnown RBP12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 SEC61A1P61619 476 aaKnown RBP12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 LCN6P62502 163 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 HLXQ14774 488 aaPredicted RBP12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 ISXQ2M1V0 245 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 ODF4Q2M2E3 257 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 ITPRIPL2Q3MIP1 535 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 ALKAL2Q6UX46 152 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 MAMSTRQ6ZN01 415 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 ZNF761Q86XN6 746 aaPredicted RBP12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 GLB1L2Q8IW92 636 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 LSM14AQ8ND56 463 aaKnown RBP12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 OR10AC1Q8NH08 325 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 ZDHHC1Q8WTX9 485 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 TMPRSS13Q9BYE2 586 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 PPA2Q9H2U2 334 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 SRA1Q9HD15 236 aaKnown RBP12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 IKZF2Q9UKS7 526 aa12.06□□□□□ -0.48
SLC28A1-201ENST00000286749 F5P12259 2224 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 A0A0J9YY10 115 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 OR2W5A6NFC9 320 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 OR6C65A6NJZ3 312 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 DCTN6O00399 190 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 TSPAN4O14817 238 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 EGFP01133 1207 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 RLN1P04808 185 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 HIST1H2ABP04908 130 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 NMBP08949 121 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 HOXC4P09017 264 aaPredicted RBP12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 ATF4P18848 351 aaPredicted RBP12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 ADH7P40394 386 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 MNDAP41218 407 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 GRK6P43250 576 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 H2BFSP57053 126 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 KIAA1324Q6UXG2 1013 aaKnown RBP12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 HIST3H2AQ7L7L0 130 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 OR4D10Q8NGI6 311 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 OR4C16Q8NGL9 310 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 HIST1H2ACQ93077 130 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 CCDC74AQ96AQ1 378 aa12.05□□□□□ -0.48
SLC28A1-201ENST00000286749 RBM18Q96H35 190 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms