RNA–Protein interactions for RNA: ENST00000278833.3

ROM1-201, Transcript of retinal outer segment membrane protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ROM1, Length 1,878 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ROM1-201ENST00000278833 HPGDP15428 266 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 PRKCAP17252 672 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 CTXN1P60606 82 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 ALKBH1Q13686 389 aaKnown RBP22.77■■□□□ 1.24
ROM1-201ENST00000278833 FAM205BPQ63HN1 556 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 SDR16C5Q8N3Y7 309 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 OR2T4Q8NH00 348 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 PHOSPHO1Q8TCT1 267 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 LMF1Q96S06 567 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 CCDC86Q9H6F5 360 aaKnown RBP22.77■■□□□ 1.24
ROM1-201ENST00000278833 ING4Q9UNL4 249 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 V9GY05 133 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 IGHV1OR15-9A0A0B4J2B8 117 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 A0A1B0GVI7 797 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 PHYHO14832 338 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 GNG2P59768 71 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 LTBQ06643 244 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 EGR3Q06889 387 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 GSG1Q2KHT4 349 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 Q499Y3 187 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 OR11H7Q8NGC8 314 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 THRSPQ92748 146 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 ADIPOR1Q96A54 375 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 LPAR4Q99677 370 aa22.77■■□□□ 1.24
ROM1-201ENST00000278833 NXF5Q9H1B4 397 aaKnown RBP22.77■■□□□ 1.24
ROM1-201ENST00000278833 MRM2Q9UI43 246 aaKnown RBP22.77■■□□□ 1.24
ROM1-201ENST00000278833 TDRD6O60522 2096 aaKnown RBP22.76■■□□□ 1.23
ROM1-201ENST00000278833 LOC105378220A0A1B0GUY1 285 aaPredicted RBP22.76■■□□□ 1.23
ROM1-201ENST00000278833 RAF1P04049 648 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 WNT1P04628 370 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 H2AFB2P0C5Z0 115 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 GIFP27352 417 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 GDNFP39905 211 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 AP3S2P59780 193 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 IKZF1Q13422 519 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 THOC7Q6I9Y2 204 aaKnown RBP22.76■■□□□ 1.23
ROM1-201ENST00000278833 OGFOD3Q6PK18 319 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 APOOLQ6UXV4 268 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 TMEM105Q8N8V8 129 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 NSMAFQ92636 917 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 GPR137Q96N19 417 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 ZFP3Q96NJ6 502 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 PCED1AQ9H1Q7 454 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 UCKL1Q9NWZ5 548 aa22.76■■□□□ 1.23
ROM1-201ENST00000278833 TRAV6A0A075B6T7 132 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 IGHV5-51A0A0C4DH38 117 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 PRR33A8MZF0 331 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 TO15178 435 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 PRAF2O60831 178 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 LDOC1O95751 146 aaPredicted RBP22.75■■□□□ 1.23
ROM1-201ENST00000278833 SULT1A3P0DMM9 295 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 SULT1A4P0DMN0 295 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 CD27P26842 260 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 RPL18Q07020 188 aaKnown RBP22.75■■□□□ 1.23
ROM1-201ENST00000278833 RIPPLY1Q0D2K3 151 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 EEF1A1P5Q5VTE0 462 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 SLITRK2Q9H156 845 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 ZFP64Q9NPA5 681 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 SOHLH2Q9NX45 425 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 NPTNQ9Y639 398 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 TMEM14AQ9Y6G1 99 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 OR2W5A6NFC9 320 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 BLOC1S5-TXNDC5H3BN57 136 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 CCR9P51686 369 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 SNTB2Q13425 540 aaKnown RBP22.75■■□□□ 1.23
ROM1-201ENST00000278833 MESTQ5EB52 335 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 OLFML2AQ68BL7 652 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 CBLN3Q6UW01 205 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 NANOGNBQ7Z5D8 188 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 TTC9Q92623 222 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 TSPAN32Q96QS1 320 aa22.75■■□□□ 1.23
ROM1-201ENST00000278833 SPRTNQ9H040 489 aaPredicted RBP22.75■■□□□ 1.23
ROM1-201ENST00000278833 TRBV5-7A0A0A0MS05 114 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 ACOD1A6NK06 481 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 ZNF593O00488 134 aaPredicted RBP22.74■■□□□ 1.23
ROM1-201ENST00000278833 FABP7O15540 132 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 CDC40O60508 579 aaKnown RBP eCLIP22.74■■□□□ 1.23
ROM1-201ENST00000278833 EIF4E2O60573 245 aaKnown RBP22.74■■□□□ 1.23
ROM1-201ENST00000278833 DDAH2O95865 285 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 GFERP55789 205 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 ELAVL1Q15717 326 aaKnown RBP22.74■■□□□ 1.23
ROM1-201ENST00000278833 PWWP2BQ6NUJ5 590 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 FDX2Q6P4F2 183 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 LRRN1Q6UXK5 716 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 DNM1P46Q6ZS02 220 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 TMEM151BQ8IW70 566 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 ZNF721Q8TF20 911 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 ZDHHC12Q96GR4 267 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 KLHL15Q96M94 604 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 WDR76Q9H967 626 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 CUTCQ9NTM9 273 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 KLHL9Q9P2J3 617 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 KLHDC2Q9Y2U9 406 aa22.74■■□□□ 1.23
ROM1-201ENST00000278833 MEIKINA0A087WXM9 373 aa22.73■■□□□ 1.23
ROM1-201ENST00000278833 ZNF254O75437 659 aa22.73■■□□□ 1.23
ROM1-201ENST00000278833 RENP00797 406 aa22.73■■□□□ 1.23
ROM1-201ENST00000278833 BGLAPP02818 100 aa22.73■■□□□ 1.23
ROM1-201ENST00000278833 C19orf57Q0VDD7 668 aa22.73■■□□□ 1.23
ROM1-201ENST00000278833 LIPNQ5VXI9 398 aa22.73■■□□□ 1.23
ROM1-201ENST00000278833 STAC2Q6ZMT1 411 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms