RNA–Protein interactions for RNA: ENST00000274030.10

USP53-201, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP53, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-201ENST00000274030 OR52I1Q8NGK6 324 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 WDR76Q9H967 626 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 NRIP3Q9NQ35 241 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 TUBG2Q9NRH3 451 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 PCDHGA5Q9Y5G8 931 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 IGLV3-10A0A075B6K4 115 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 IGHV3-64DA0A0J9YX35 117 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 ANKRD33BA6NCL7 494 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 NRG2O14511 850 aaPredicted RBP10.59□□□□□ -0.71
USP53-201ENST00000274030 CD63P08962 238 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 RRAS2P62070 204 aaPredicted RBP10.59□□□□□ -0.71
USP53-201ENST00000274030 ZNF813Q6ZN06 617 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 KIAA0907Q7Z7F0 614 aaPredicted RBP10.59□□□□□ -0.71
USP53-201ENST00000274030 SYT9Q86SS6 491 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 OR51D1Q8NGF3 324 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 C4BP0C0L5 1744 aa10.59□□□□□ -0.71
USP53-201ENST00000274030 ZC3H12DA2A288 527 aaKnown RBP10.58□□□□□ -0.72
USP53-201ENST00000274030 LIM2P55344 173 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 GPR85P60893 370 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 RPP30P78346 268 aaKnown RBP10.58□□□□□ -0.72
USP53-201ENST00000274030 NKX6-1P78426 367 aaPredicted RBP10.58□□□□□ -0.72
USP53-201ENST00000274030 SOWAHCQ53LP3 525 aaPredicted RBP10.58□□□□□ -0.72
USP53-201ENST00000274030 NXNL2Q5VZ03 156 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 NKAIN4Q8IVV8 208 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 HRASLS5Q96KN8 279 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 PADI1Q9ULC6 663 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 PRRT4C9JH25 899 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 ACOT8O14734 319 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 P2RX6O15547 441 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 CHRNB1P11230 501 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 SLC35A1P78382 337 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 PDLIM3Q53GG5 364 aaPredicted RBP10.58□□□□□ -0.72
USP53-201ENST00000274030 PAN3Q58A45 887 aaKnown RBP10.58□□□□□ -0.72
USP53-201ENST00000274030 SLC46A1Q96NT5 459 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 CDCP1Q9H5V8 836 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 GFOD1Q9NXC2 390 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 PPT2Q9UMR5 302 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 NTNG1Q9Y2I2 539 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 TLCD2A6NGC4 264 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 CTNSO60931 367 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 AKR7A3O95154 331 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 TMEM11P17152 192 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 RAB4AP20338 218 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 GPLD1P80108 840 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 SHHQ15465 462 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 DUSP5Q16690 384 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 FAM71E1Q6IPT2 247 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 ZC3HAV1LQ96H79 300 aaKnown RBP10.58□□□□□ -0.72
USP53-201ENST00000274030 PDCD1LG2Q9BQ51 273 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 SGPP1Q9BX95 441 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 MCOLN1Q9GZU1 580 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 HRASLSQ9HDD0 168 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 SEMA4GQ9NTN9 838 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 SPHK1Q9NYA1 384 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 KDM3BQ7LBC6 1761 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 NWD2Q9ULI1 1742 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 HMX2A2RU54 273 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 ANKRD34BA5PLL1 514 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 D6RAR5 112 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 SCG5P05408 212 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 ZNF26P17031 533 aaPredicted RBP10.58□□□□□ -0.72
USP53-201ENST00000274030 ENPP1P22413 925 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 MMP11P24347 488 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 HOXA9P31269 272 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 TGM4P49221 684 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 Q499Y3 187 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 GLYATL3Q5SZD4 288 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 HENMT1Q5T8I9 393 aaKnown RBP10.58□□□□□ -0.72
USP53-201ENST00000274030 SIRT6Q8N6T7 355 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 OR56B1Q8NGI3 324 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 GAB3Q8WWW8 586 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 C1QTNF6Q9BXI9 259 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 HIF1ANQ9NWT6 349 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 FBXO7Q9Y3I1 522 aa10.58□□□□□ -0.72
USP53-201ENST00000274030 A0A1B0GTW7 788 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 LRIT2A6NDA9 550 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 A8MXE2 369 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 SMLR1H3BR10 107 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 LPLP06858 475 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 CCR6P51684 374 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 MRPS34P82930 218 aaKnown RBP10.57□□□□□ -0.72
USP53-201ENST00000274030 HBMQ6B0K9 141 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 Q6ZTK2 550 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 MZB1Q8WU39 189 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 LIN37Q96GY3 246 aaPredicted RBP10.57□□□□□ -0.72
USP53-201ENST00000274030 ZNF436Q9C0F3 470 aaPredicted RBP10.57□□□□□ -0.72
USP53-201ENST00000274030 CHST8Q9H2A9 424 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 UBQLN3Q9H347 655 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 LIN7BQ9HAP6 207 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 MOKQ9UQ07 419 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 FAM166BA8MTA8 275 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 GMDSO60547 372 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 PMP2P02689 132 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 HCCSP53701 268 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 TAS2R46P59540 309 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 MZT1Q08AG7 82 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 STEAP3Q658P3 488 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 DCXRQ7Z4W1 244 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 ITPKCQ96DU7 683 aa10.57□□□□□ -0.72
USP53-201ENST00000274030 A4GALTQ9NPC4 353 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms