RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 DERL3Q96Q80 235 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 TESQ9UGI8 421 aaKnown RBP10.66□□□□□ -0.7
VPS33A-201ENST00000267199 FITM1A5D6W6 292 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 SULT1C2O00338 296 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 DCTDP32321 178 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 METAP1P53582 386 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 IFITM2Q01629 132 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 GPR18Q14330 331 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 Q499Y3 187 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 SLC6A19Q695T7 634 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 ADAM5Q6NVV9 412 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 WDSUB1Q8N9V3 476 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 PLPP7Q8NBV4 271 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 PTDSS2Q9BVG9 487 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 TPSD1Q9BZJ3 242 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 PUS1Q9Y606 427 aaKnown RBP eCLIP10.66□□□□□ -0.7
VPS33A-201ENST00000267199 ALPK2Q86TB3 2170 aa10.66□□□□□ -0.7
VPS33A-201ENST00000267199 ZNF593O00488 134 aaPredicted RBP10.65□□□□□ -0.7
VPS33A-201ENST00000267199 CHRM4P08173 479 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 GIPP09681 153 aaPredicted RBP10.65□□□□□ -0.7
VPS33A-201ENST00000267199 MAOBP27338 520 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 BSGP35613 385 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 ARRB1P49407 418 aaPredicted RBP10.65□□□□□ -0.7
VPS33A-201ENST00000267199 CLRN1P58418 232 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 SLC22A6Q4U2R8 563 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 TCEAL6Q6IPX3 200 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 MAMDC2Q7Z304 686 aaPredicted RBP10.65□□□□□ -0.7
VPS33A-201ENST00000267199 RNF113BQ8IZP6 322 aaKnown RBP10.65□□□□□ -0.7
VPS33A-201ENST00000267199 CMTM4Q8IZR5 234 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 PGAM5Q96HS1 289 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 HHIPL1Q96JK4 782 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 RNF170Q96K19 258 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 OR52A5Q9H2C5 316 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 TCEAL2Q9H3H9 227 aaPredicted RBP10.65□□□□□ -0.7
VPS33A-201ENST00000267199 HRASLSQ9HDD0 168 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 FTSJ1Q9UET6 329 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 CCL27Q9Y4X3 112 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 CCDC163A0A0D9SF12 145 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 A0A1B0GWA3 101 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 RAB19A4D1S5 217 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 ITGB8P26012 769 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 CLDN6P56747 220 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 NKX6-1P78426 367 aaPredicted RBP10.65□□□□□ -0.7
VPS33A-201ENST00000267199 ZNF620Q6ZNG0 422 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 TMEM151BQ8IW70 566 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 HIST1H2AAQ96QV6 131 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 ADOQ96SZ5 270 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 C20orf24Q9BUV8 137 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 HDAC8Q9BY41 377 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 SPHK1Q9NYA1 384 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 MBD1Q9UIS9 605 aaPredicted RBP10.65□□□□□ -0.7
VPS33A-201ENST00000267199 TTLL8A6PVC2 850 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 GABARAPH6UMI1 98 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 ALDH3B1P43353 468 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 DEFA6Q01524 100 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 TMEM64Q6YI46 380 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 BPHLQ86WA6 291 aaPredicted RBP10.65□□□□□ -0.7
VPS33A-201ENST00000267199 MCATQ8IVS2 390 aaKnown RBP10.65□□□□□ -0.7
VPS33A-201ENST00000267199 RASD2Q96D21 266 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 RADILQ96JH8 1075 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 CLCC1Q96S66 551 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 FGF22Q9HCT0 170 aa10.65□□□□□ -0.7
VPS33A-201ENST00000267199 C17orf105B2RV13 164 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 PHYHO14832 338 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 TO15178 435 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 PAPLNO95428 1278 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 IFNA2P01563 188 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 CXCL10P02778 98 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 CLUP10909 449 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 CDK2P24941 298 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 RPS27P42677 84 aaKnown RBP10.65□□□□□ -0.71
VPS33A-201ENST00000267199 RABIFP47224 123 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 RFX2P48378 723 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 UBE2IP63279 158 aaKnown RBP10.65□□□□□ -0.71
VPS33A-201ENST00000267199 RAE1P78406 368 aaKnown RBP10.65□□□□□ -0.71
VPS33A-201ENST00000267199 DUSP5Q16690 384 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 TMEM200AQ86VY9 491 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 SLC6A17Q9H1V8 727 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 THAP10Q9P2Z0 257 aaPredicted RBP10.65□□□□□ -0.71
VPS33A-201ENST00000267199 HHLA2Q9UM44 414 aa10.65□□□□□ -0.71
VPS33A-201ENST00000267199 CKAP5Q14008 2032 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 KDM4EB2RXH2 506 aaPredicted RBP10.64□□□□□ -0.71
VPS33A-201ENST00000267199 HYAL3O43820 417 aaPredicted RBP10.64□□□□□ -0.71
VPS33A-201ENST00000267199 C1QCP02747 245 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 IFNGR1P15260 489 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 ACHEP22303 614 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 DPTQ07507 201 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 MEF2DQ14814 521 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 CLLU1Q5K131 121 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 SLC16A9Q7RTY1 509 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 C14orf79Q96F83 325 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 WDFY2Q96P53 400 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 BARHL1Q9BZE3 327 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 CCDC86Q9H6F5 360 aaKnown RBP10.64□□□□□ -0.71
VPS33A-201ENST00000267199 SCML1Q9UN30 329 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 CCDC88CQ9P219 2028 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 PRSS44E7EML9 344 aa10.64□□□□□ -0.71
VPS33A-201ENST00000267199 IDH3GP51553 393 aaPredicted RBP10.64□□□□□ -0.71
VPS33A-201ENST00000267199 ZNF41P51814 821 aaPredicted RBP10.64□□□□□ -0.71
VPS33A-201ENST00000267199 ANKRD33Q7Z3H0 272 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms