RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 SELENOPP49908 381 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 EGR4Q05215 589 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 ERV3-1Q14264 604 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 FZD2Q14332 565 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 GPR139Q6DWJ6 353 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 LEG1Q6P5S2 330 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 STAC2Q6ZMT1 411 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 LUZP2Q86TE4 346 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 CDC20BQ86Y33 519 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 ELMOD2Q8IZ81 293 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 FRMD1Q8N878 549 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 ZNF511Q8NB15 262 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 GCDHQ92947 438 aaPredicted RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 HAVCR1Q96D42 359 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 MOGAT1Q96PD6 335 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 TSPAN10Q9H1Z9 355 aaPredicted RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 OR10A5Q9H207 317 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 C8orf33Q9H7E9 229 aaPredicted RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 LMAN1LQ9HAT1 526 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 PRTFDC1Q9NRG1 225 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 RXFP3Q9NSD7 469 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 WSB2Q9NYS7 404 aaPredicted RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 FRRS1LQ9P0K9 344 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 PIPOXQ9P0Z9 390 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 ZNF346Q9UL40 294 aaKnown RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 SLC6A5Q9Y345 797 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 KMT2EQ8IZD2 1858 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 ZNF318Q5VUA4 2279 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 LAMA1P25391 3075 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 SPTY2D1-AS1A0A0U1RR47 76 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 DCTN6O00399 190 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 KRT33AO76009 404 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 NSA2O95478 260 aaKnown RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 RAB40ALP0C0E4 278 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 DRD1P21728 446 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 AP2S1P53680 142 aaPredicted RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 MAT1AQ00266 395 aaKnown RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 DHODHQ02127 395 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 STX4Q12846 297 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 SKP2Q13309 424 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 ALKBH1Q13686 389 aaKnown RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 CCINQ13939 588 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 CD226Q15762 336 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 NNATQ16517 81 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 SFRP4Q6FHJ7 346 aaPredicted RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 SIGIRRQ6IA17 410 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 WBP2NLQ6ICG8 309 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 LINGO2Q7L985 606 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 NUP54Q7Z3B4 507 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 DND1Q8IYX4 353 aaKnown RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 OR6K6Q8NGW6 343 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 ADAMTS18Q8TE60 1221 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 RAB40AQ8WXH6 277 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 DGAT2Q96PD7 388 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 TSSK2Q96PF2 358 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 LMF1Q96S06 567 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 SMAD5Q99717 465 aaKnown RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 ZNF436Q9C0F3 470 aaPredicted RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 LIN7BQ9HAP6 207 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 MMP25Q9NPA2 562 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 EXOSC3Q9NQT5 275 aaKnown RBP11.32□□□□□ -0.6
BEST3-201ENST00000266661 KLHL9Q9P2J3 617 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 ERVK-19Q9WJR5 959 aa11.32□□□□□ -0.6
BEST3-201ENST00000266661 OR4C45A6NMZ5 311 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 FAM171A2A8MVW0 826 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 PRAMEF26H0Y7S4 382 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 PSMD9O00233 223 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 TSC22D2O75157 780 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 SEMA4FO95754 770 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 PNMTP11086 282 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 ENPP1P22413 925 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 DNASE1P24855 282 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 CFPP27918 469 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 SDHAP31040 664 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 P2RX1P51575 399 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 PGDP52209 483 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 CLDN12P56749 244 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 MRPS10P82664 201 aaKnown RBP11.31□□□□□ -0.6
BEST3-201ENST00000266661 HHEXQ03014 270 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 CSRP2Q16527 193 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 Q499Y3 187 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 ZNF542PQ5EBM4 170 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 LIPNQ5VXI9 398 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 APOOLQ6UXV4 268 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 OR6V1Q8N148 313 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 TMEM105Q8N8V8 129 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 OR6C4Q8NGE1 309 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 NSMAFQ92636 917 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 MIB2Q96AX9 1013 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 KLHDC3Q9BQ90 382 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 GPR174Q9BXC1 333 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 MRPL15Q9P015 296 aaKnown RBP11.31□□□□□ -0.6
BEST3-201ENST00000266661 AKAP7Q9P0M2 348 aaPredicted RBP11.31□□□□□ -0.6
BEST3-201ENST00000266661 KLK11Q9UBX7 282 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 SIT1Q9Y3P8 196 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 TMEM184BQ9Y519 407 aaPredicted RBP11.31□□□□□ -0.6
BEST3-201ENST00000266661 HEATR5AQ86XA9 2040 aa11.31□□□□□ -0.6
BEST3-201ENST00000266661 A0A1B0GVT2 93 aa11.3□□□□□ -0.6
BEST3-201ENST00000266661 A0A1W2PQ72 361 aa11.3□□□□□ -0.6
BEST3-201ENST00000266661 TMEM72A0PK05 275 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms