RNA–Protein interactions for RNA: ENST00000265044.6

SSR3-201, Transcript of signal sequence receptor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSR3, Length 3,716 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-201ENST00000265044 TNFRSF10AO00220 468 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 OR8G3PP0DMU2 310 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 CCL3P10147 92 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 SDC2P34741 201 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 RPL27P61353 136 aaKnown RBP8.44□□□□□ -1.06
SSR3-201ENST00000265044 RPS25P62851 125 aaKnown RBP8.44□□□□□ -1.06
SSR3-201ENST00000265044 AQP6Q13520 282 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 PCOLCEQ15113 449 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 TMEM201Q5SNT2 666 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 PEAR1Q5VY43 1037 aaPredicted RBP8.44□□□□□ -1.06
SSR3-201ENST00000265044 RPTNQ6XPR3 784 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 VASH2Q86V25 355 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 ARIH2OSQ8N7S6 290 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 POC5Q8NA72 575 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 PTP4A1Q93096 173 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 MRGPRX4Q96LA9 322 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 KLHL15Q96M94 604 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 LRFN5Q96NI6 719 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 TCF7L1Q9HCS4 588 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 FBXL2Q9UKC9 423 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 BOKQ9UMX3 212 aaPredicted RBP8.44□□□□□ -1.06
SSR3-201ENST00000265044 GRIP1Q9Y3R0 1128 aa8.44□□□□□ -1.06
SSR3-201ENST00000265044 A0A1W2PQL4 384 aaPredicted RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 OR6C68A6NDL8 312 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 FAM166BA8MTA8 275 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 H3BMH7 237 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 FADS1O60427 444 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 SERPINA3P01011 423 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 OR2T7P0C7T2 308 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 RGS21Q2M5E4 152 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 PYDC2Q56P42 97 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 PDSS1Q5T2R2 415 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 DDI2Q5TDH0 399 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 TIPARPQ7Z3E1 657 aaKnown RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 OR2T27Q8NH04 317 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 M1APQ8TC57 530 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 RBM24Q9BX46 236 aaKnown RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 MMP27Q9H306 513 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 ISG20L2Q9H9L3 353 aaKnown RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 TMEM129A0AVI4 362 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 A6NIZ1 184 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 GLCEO94923 617 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 SERPINA7P05543 415 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 POU3F2P20265 443 aaPredicted RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 OPRL1P41146 370 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 EFNA3P52797 238 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 RAP1BP61224 184 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 RAP1AP62834 184 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 CSRP2Q16527 193 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 LYPD4Q6UWN0 246 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 SLC43A2Q8N370 569 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 SLC15A4Q8N697 577 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 NFAM1Q8NET5 270 aaPredicted RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 FBLIM1Q8WUP2 373 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 SNRNP27Q8WVK2 155 aaKnown RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 OPALINQ96PE5 141 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 BCL7BQ9BQE9 202 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 PIGQQ9BRB3 760 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 TTYH2Q9BSA4 534 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 HDHD2Q9H0R4 259 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 SLC26A1Q9H2B4 701 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 ING1Q9UK53 422 aaPredicted RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 LAMA1P25391 3075 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 VPS13AQ96RL7 3174 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 TMEM131Q92545 1883 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 GJE1A6NN92 205 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 ZNF593O00488 134 aaPredicted RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 ZNF354AO60765 605 aaPredicted RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 ARL6IP5O75915 188 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 COX6A1P12074 109 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 HSD11B1P28845 292 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 GNALP38405 381 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 CDKN2AP42771 156 aaKnown RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 SLC6A9P48067 706 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 SUMO3P55854 103 aaPredicted RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 CAV3P56539 151 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 MYBPHQ13203 477 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 ZNF829Q3KNS6 432 aaPredicted RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 ANKDD1AQ495B1 522 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 SPINK14Q6IE38 97 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 MDGA2Q7Z553 956 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 MRGPREQ86SM8 312 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 BEST3Q8N1M1 668 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 C19orf18Q8NEA5 215 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 WDR77Q9BQA1 342 aaPredicted RBP8.43□□□□□ -1.06
SSR3-201ENST00000265044 FUZQ9BT04 418 aa8.43□□□□□ -1.06
SSR3-201ENST00000265044 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.42□□□□□ -1.06
SSR3-201ENST00000265044 TRIM64CA6NLI5 447 aa8.42□□□□□ -1.06
SSR3-201ENST00000265044 PTP4A3O75365 173 aa8.42□□□□□ -1.06
SSR3-201ENST00000265044 KLF7O75840 302 aaPredicted RBP8.42□□□□□ -1.06
SSR3-201ENST00000265044 TP53P04637 393 aaPredicted RBP8.42□□□□□ -1.06
SSR3-201ENST00000265044 CD2P06729 351 aa8.42□□□□□ -1.06
SSR3-201ENST00000265044 UMODP07911 640 aa8.42□□□□□ -1.06
SSR3-201ENST00000265044 LIMS3P0CW19 117 aa8.42□□□□□ -1.06
SSR3-201ENST00000265044 LIMS4P0CW20 117 aa8.42□□□□□ -1.06
SSR3-201ENST00000265044 DIO1P49895 249 aa8.42□□□□□ -1.06
SSR3-201ENST00000265044 PRKXP51817 358 aa8.42□□□□□ -1.06
SSR3-201ENST00000265044 CLDN17P56750 224 aa8.42□□□□□ -1.06
SSR3-201ENST00000265044 CSNK2A1P68400 391 aaPredicted RBP8.42□□□□□ -1.06
SSR3-201ENST00000265044 HSF1Q00613 529 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms