RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 FAM26EQ8N5C1 309 aa12.88□□□□□ -0.35
CDH3-201ENST00000264012 BCORP1Q8N888 145 aa12.88□□□□□ -0.35
CDH3-201ENST00000264012 ANKRD53Q8N9V6 530 aa12.88□□□□□ -0.35
CDH3-201ENST00000264012 STEAP2Q8NFT2 490 aa12.88□□□□□ -0.35
CDH3-201ENST00000264012 OR5L1Q8NGL2 311 aa12.88□□□□□ -0.35
CDH3-201ENST00000264012 EMC9Q9Y3B6 208 aa12.88□□□□□ -0.35
CDH3-201ENST00000264012 APEX1P27695 318 aaKnown RBP12.87□□□□□ -0.35
CDH3-201ENST00000264012 ZNF616Q08AN1 781 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 SLC35D3Q5M8T2 416 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 APOOLQ6UXV4 268 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 ZNF620Q6ZNG0 422 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 MOB3CQ70IA8 216 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 TRAPPC6BQ86SZ2 158 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 RPS19BP1Q86WX3 136 aaKnown RBP12.87□□□□□ -0.35
CDH3-201ENST00000264012 OR9K2Q8NGE7 335 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 TEAD3Q99594 435 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 PIGQQ9BRB3 760 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 GABARAPL3Q9BY60 117 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 ZFP57Q9NU63 452 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 CISD3P0C7P0 127 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 RUNX2Q13950 521 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 BEST4Q8NFU0 473 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 PPP1R35Q8TAP8 253 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 STT3BQ8TCJ2 826 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 LTB4R2Q9NPC1 389 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 NPAP1Q9NZP6 1156 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 C1QAP02745 245 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 GABRG2P18507 467 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 GFERP55789 205 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 SEC61A1P61619 476 aaKnown RBP12.87□□□□□ -0.35
CDH3-201ENST00000264012 ALKBH1Q13686 389 aaKnown RBP12.87□□□□□ -0.35
CDH3-201ENST00000264012 EXT1Q16394 746 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 Q6ZS52 159 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 ESX1Q8N693 406 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 NANOGP1Q8N7R0 232 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 EID2BQ96D98 161 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 HINT2Q9BX68 163 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 ANKRD10Q9NXR5 420 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 SERGEFQ9UGK8 458 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 COL4A5P29400 1685 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 TSPAN11A1L157 253 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 SMCO3A2RU48 225 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 H0YIG0 161 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 SELENOFO60613 162 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 ATG12O94817 140 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 CRYZL1O95825 349 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 GAAP10253 952 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 BDKRB2P30411 391 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 PPICP45877 212 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 P2RX1P51575 399 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 IL13RA1P78552 427 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 H1FNTQ75WM6 255 aaPredicted RBP12.87□□□□□ -0.35
CDH3-201ENST00000264012 KDM8Q8N371 416 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 SPEM1Q8N4L4 309 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 TSLPQ969D9 159 aa12.87□□□□□ -0.35
CDH3-201ENST00000264012 CACNA1CQ13936 2221 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 SPTY2D1-AS1A0A0U1RR47 76 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 TMEM129A0AVI4 362 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 ZAR1LA6NP61 321 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 PPM1DO15297 605 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 PIPP12273 146 aaPredicted RBP12.86□□□□□ -0.35
CDH3-201ENST00000264012 HTR2CP28335 458 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 DLX5P56178 289 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 CARD18P57730 90 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 MFAP5Q13361 173 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 ZMAT1Q5H9K5 638 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 C1orf53Q5VUE5 145 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 C16orf52Q8NHV5 167 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 ZNF707Q96C28 371 aaPredicted RBP12.86□□□□□ -0.35
CDH3-201ENST00000264012 ARSGQ96EG1 525 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 TSNAXQ99598 290 aaKnown RBP12.86□□□□□ -0.35
CDH3-201ENST00000264012 RPP25Q9BUL9 199 aaKnown RBP12.86□□□□□ -0.35
CDH3-201ENST00000264012 PAPOLGQ9BWT3 736 aaKnown RBP12.86□□□□□ -0.35
CDH3-201ENST00000264012 A3GALT2U3KPV4 340 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 KNTC1P50748 2209 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 ALDOBP05062 364 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 SBK2P0C263 348 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 ZNF44P15621 663 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 RRADP55042 308 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 MPEG1Q2M385 716 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 GLYR1Q49A26 553 aaPredicted RBP12.86□□□□□ -0.35
CDH3-201ENST00000264012 STEAP3Q658P3 488 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 RAB11FIP2Q7L804 512 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 BPIFB2Q8N4F0 458 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 DNAAF1Q8NEP3 725 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 ZNF385DQ9H6B1 395 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 HINT3Q9NQE9 182 aaKnown RBP12.86□□□□□ -0.35
CDH3-201ENST00000264012 DNAJB11Q9UBS4 358 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 KCND3Q9UK17 655 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 NOSIPQ9Y314 301 aaKnown RBP12.86□□□□□ -0.35
CDH3-201ENST00000264012 ADAM18Q9Y3Q7 739 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 LSM5Q9Y4Y9 91 aaKnown RBP12.86□□□□□ -0.35
CDH3-201ENST00000264012 ASCC3Q8N3C0 2202 aaKnown RBP12.86□□□□□ -0.35
CDH3-201ENST00000264012 BRWD1Q9NSI6 2320 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 A0A087WV62 115 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 B4DXG7 233 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 DOK2O60496 412 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 SERPINE2P07093 398 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 EFNA3P52797 238 aa12.86□□□□□ -0.35
CDH3-201ENST00000264012 TMEM179BQ7Z7N9 219 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms