RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 C20orf85Q9H1P6 137 aa16.22■□□□□ 0.19
NOTCH3-201ENST00000263388 LINC00597Q9H2U6 94 aa16.22■□□□□ 0.19
NOTCH3-201ENST00000263388 ALPK2Q86TB3 2170 aa16.22■□□□□ 0.19
NOTCH3-201ENST00000263388 RGPD4Q7Z3J3 1758 aa16.22■□□□□ 0.19
NOTCH3-201ENST00000263388 CBX7O95931 251 aa16.22■□□□□ 0.19
NOTCH3-201ENST00000263388 ZNF865P0CJ78 1059 aaPredicted RBP16.22■□□□□ 0.19
NOTCH3-201ENST00000263388 HOXA1P49639 335 aaPredicted RBP16.22■□□□□ 0.19
NOTCH3-201ENST00000263388 CLDN2P57739 230 aa16.22■□□□□ 0.19
NOTCH3-201ENST00000263388 AADACL3Q5VUY0 350 aa16.22■□□□□ 0.19
NOTCH3-201ENST00000263388 GTF2H5Q6ZYL4 71 aa16.22■□□□□ 0.19
NOTCH3-201ENST00000263388 HRASLS5Q96KN8 279 aa16.22■□□□□ 0.19
NOTCH3-201ENST00000263388 WASH6PQ9NQA3 447 aa16.22■□□□□ 0.19
NOTCH3-201ENST00000263388 NUPL2O15504 423 aaKnown RBP16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 RNLSQ5VYX0 342 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 TMEM71Q6P5X7 295 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 FRMD1Q8N878 549 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 GAB3Q8WWW8 586 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 ACTL7AQ9Y615 435 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 SRMP19623 302 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 SPRED3Q2MJR0 410 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 SLC36A2Q495M3 483 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 SOHLH1Q5JUK2 328 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 MOB3CQ70IA8 216 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 AHCTF1Q8WYP5 2266 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 MYADML2A6NDP7 307 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 MEIS3P2A8K0S8 358 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 F3P13726 295 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 NPSR1Q6W5P4 371 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 SHISA6Q6ZSJ9 500 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 MUCL1Q96DR8 90 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 PUS1Q9Y606 427 aaKnown RBP eCLIP16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 MBLAC1A4D2B0 266 aaPredicted RBP16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 HTR5AP47898 357 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 C17orf67Q0P5P2 114 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 RBMXL3Q8N7X1 1067 aaKnown RBP16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 TAAR2Q9P1P5 351 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 BET1O15155 118 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 FURINP09958 794 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 CEBPBP17676 345 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 VPS25Q9BRG1 176 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 POFUT1Q9H488 388 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 PCDHB10Q9UN67 800 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 EMC9Q9Y3B6 208 aa16.21■□□□□ 0.19
NOTCH3-201ENST00000263388 OR7C1O76099 320 aaPredicted RBP16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 CD46P15529 392 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 PPP1R2P9O14990 202 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 CT45A6P0DMU7 189 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 CT45A5P0DMU8 189 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 CT45A7P0DMV0 189 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 CT45A8P0DMV1 189 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 CT45A9P0DMV2 189 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 ADRA1AP35348 466 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 SLC35A1P78382 337 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 CT45A2Q5DJT8 189 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 CT45A1Q5HYN5 189 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 SLC22A24Q8N4F4 322 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 PXT1Q8NFP0 134 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 CT45A3Q8NHU0 189 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 ZNF296Q8WUU4 475 aaPredicted RBP16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 SLAMF8Q9P0V8 285 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 LHX3Q9UBR4 397 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 UGT2A1Q9Y4X1 527 aa16.21■□□□□ 0.18
NOTCH3-201ENST00000263388 LOC100289279A0A1B0GTE1 492 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 DFFBO76075 338 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 OR5M10Q6IEU7 315 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 ZNF425Q6IV72 752 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 WDR88Q6ZMY6 472 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 DPY19L2P2Q6ZN68 376 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 OR4N2Q8NGD1 307 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 FAM213BQ8TBF2 198 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 WDR83Q9BRX9 315 aaKnown RBP16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 HRASLSQ9HDD0 168 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 HCFC1R1Q9NWW0 138 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 USP3Q9Y6I4 520 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 DNAJC25-GNG10A0A024R161 153 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 DAPP51397 102 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 PHYHD1Q5SRE7 291 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 PATZ1Q9HBE1 687 aaKnown RBP16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 GABRA2P47869 451 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 FAM74A1Q5RGS3 127 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 OGFOD3Q6PK18 319 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 LFNGQ8NES3 379 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 TMEM106AQ96A25 262 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 NIPAL2Q9H841 368 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 MED20Q9H944 212 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 ANK1P16157 1881 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 TMEM72A0PK05 275 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 MRPL33O75394 65 aaKnown RBP16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 ARSAP15289 507 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 GDNFP39905 211 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 YPEL5P62699 121 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 HOXC5Q00444 222 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 SORDQ00796 357 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 SLC16A14Q7RTX9 510 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 GHSRQ92847 366 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 UTP4Q969X6 686 aaKnown RBP16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 TMEM38AQ9H6F2 299 aa16.2■□□□□ 0.18
NOTCH3-201ENST00000263388 RNF186Q9NXI6 227 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms