RNA–Protein interactions for RNA: ENST00000261443.9

CSDE1-201, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 3,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-201ENST00000261443 CD1AP06126 327 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 SFTA3P0C7M3 94 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 OR8U8P0C7N1 319 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 C8orf89P0DMQ9 161 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 MUC1P15941 1255 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 RCC1P18754 421 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 PAX6P26367 422 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 CD70P32970 193 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 PRKXP51817 358 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 HTRA4P83105 476 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 FAM110CQ1W6H9 321 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 AMZ1Q400G9 498 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 PRRT3Q5FWE3 981 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 PRAMEF17Q5VTA0 474 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 OR10K2Q6IF99 312 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 LPCAT3Q6P1A2 487 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 STAC2Q6ZMT1 411 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 WDR88Q6ZMY6 472 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 ETV3LQ6ZN32 361 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 NDUFAF7Q7L592 441 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 SLC35F2Q8IXU6 374 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 TRAM1L1Q8N609 369 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 ZNF614Q8N883 585 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 OR56A1Q8NGH5 318 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 SFXN5Q8TD22 340 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 OVCA2Q8WZ82 227 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 GTF3AQ92664 365 aaKnown RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 ZNF689Q96CS4 500 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 PIK3IP1Q96FE7 263 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 CNN2Q99439 309 aaKnown RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 MAP3K3Q99759 626 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 AIF1LQ9BQI0 150 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 GGACTQ9BVM4 153 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 LAT2Q9GZY6 243 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 SEC61A2Q9H9S3 476 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 RHOFQ9HBH0 211 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 TREM2Q9NZC2 230 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 ZNF223Q9UK11 482 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 CDV3Q9UKY7 258 aaKnown RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 CLEC4EQ9ULY5 219 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 ZNF443Q9Y2A4 671 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 WDR87Q6ZQQ6 2873 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 TRAV18A0A075B6X5 111 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 C17orf113A0A1B0GUU1 675 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 IDSB3KWA1 339 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 PSMD9O00233 223 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 OIP5O43482 229 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 MT-ND4LP03901 98 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 CD74P04233 296 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 RPN2P04844 631 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 CD2P06729 351 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 GABRR2P28476 465 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 CLDN2P57739 230 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 POLR2LP62875 67 aaKnown RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 IRF4Q15306 451 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 ELAVL1Q15717 326 aaKnown RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 FNDC3BQ53EP0 1204 aaKnown RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 RTP2Q5QGT7 225 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 SSX9Q7RTT3 188 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 C17orf64Q86WR6 236 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 BAP18Q8IXM2 172 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 OR4K14Q8NGD5 310 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 SLC39A7Q92504 469 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 GLYATL1Q969I3 302 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 TRIM43Q96BQ3 446 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 BPIFA2Q96DR5 249 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 ZNF764Q96H86 408 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 PRSS27Q9BQR3 290 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 RHBGQ9H310 441 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 RPS10P5Q9NQ39 176 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 SIGLEC7Q9Y286 467 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 CPED1A4D0V7 1026 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 ZIC2O95409 532 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 POP4O95707 220 aaKnown RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 IFNGP01579 166 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 IGHV2-5P01817 119 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 CD63P08962 238 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 AVPR2P30518 371 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 PRSS3P35030 304 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 RBM34P42696 430 aaKnown RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 SSR2P43308 183 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 SOX2P48431 317 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 PDX1P52945 283 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 SRSF4Q08170 494 aaKnown RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 DHRS2Q13268 280 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 FAM76BQ5HYJ3 339 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 KRBOX4Q5JUW0 171 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 CST9Q5W186 159 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 OR4C11Q6IEV9 310 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 C22orf39Q6P5X5 142 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 FIGNL1Q6PIW4 674 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 PRSS55Q6UWB4 352 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 LCTLQ6UWM7 567 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 FRRS1Q6ZNA5 592 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 RANBP3LQ86VV4 465 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-201ENST00000261443 NUP43Q8NFH3 380 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 OR52E2Q8NGJ4 325 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 NUBPLQ8TB37 319 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 CXorf40AQ8TE69 158 aa6.61□□□□□ -1.35
CSDE1-201ENST00000261443 C2orf15Q8WU43 125 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 99.8 ms