RNA–Protein interactions for RNA: ENST00000261058.2

CCDC54-201, Transcript of coiled-coil domain containing 54, humanhuman

APPRIS P1 BASIC

Gene CCDC54, Length 1,444 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC54-201ENST00000261058 ADAM22Q9P0K1 906 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 DCDC2Q9UHG0 476 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 ADAM28Q9UKQ2 775 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 RNF6Q9Y252 685 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 RASD1Q9Y272 281 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 NEURL4Q96JN8 1562 aa3.31□□□□□ -1.88
CCDC54-201ENST00000261058 ATP10AO60312 1499 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 ABCC11Q96J66 1382 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 CCDC7Q96M83 1385 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 FRG2CA6NGY1 282 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 CCT8L1PA6NM43 557 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 ERVV-1B6SEH8 477 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 H6PDO95479 791 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 SLC2A10O95528 541 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 CST1P01037 141 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 JCHAINP01591 159 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 ERCC1P07992 297 aaPredicted RBP3.3□□□□□ -1.88
CCDC54-201ENST00000261058 ANXA4P09525 319 aaPredicted RBP3.3□□□□□ -1.88
CCDC54-201ENST00000261058 H2AFZP0C0S5 128 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 CCNOP22674 350 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 LCN1P31025 176 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 YWHABP31946 246 aaKnown RBP3.3□□□□□ -1.88
CCDC54-201ENST00000261058 SLC1A1P43005 524 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 CRYBB2P43320 205 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 SERPINB9P50453 376 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 CLDN18P56856 261 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 ERVPABLB-1P60509 514 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 SKP1P63208 163 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 MRPS25P82663 173 aaKnown RBP3.3□□□□□ -1.88
CCDC54-201ENST00000261058 BDH1Q02338 343 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 PAX5Q02548 391 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 LRRC63Q05C16 580 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 IFFO1Q0D2I5 559 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 STX5Q13190 355 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 EXOSC2Q13868 293 aaKnown RBP3.3□□□□□ -1.88
CCDC54-201ENST00000261058 DPYSL3Q14195 570 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 TGFBIQ15582 683 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 UAP1Q16222 522 aaPredicted RBP3.3□□□□□ -1.88
CCDC54-201ENST00000261058 ALKBH6Q3KRA9 238 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 XKR4Q5GH76 650 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 EOGTQ5NDL2 527 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 H3F3CQ6NXT2 135 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 C3orf33Q6P1S2 294 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 PRMT9Q6P2P2 845 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 VITQ6UXI7 678 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 IDO2Q6ZQW0 420 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 PLCZ1Q86YW0 608 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 MFSD6LQ8IWD5 586 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 GABRG1Q8N1C3 465 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 C17orf78Q8N4C9 275 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 RHOXF1Q8NHV9 184 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 ST8SIA1Q92185 356 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 ART4Q93070 314 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 MRGPRFQ96AM1 343 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 OTUB2Q96DC9 234 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 PAXXQ9BUH6 204 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 ANGPTL4Q9BY76 406 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 DERL2Q9GZP9 239 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 ELOVL6Q9H5J4 265 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 POLD4Q9HCU8 107 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 INIPQ9NRY2 104 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 C19orf12Q9NSK7 152 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 EXD2Q9NVH0 621 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 ELOVL2Q9NXB9 296 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 EHFQ9NZC4 300 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 NYAP2Q9P242 653 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 GGA2Q9UJY4 613 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 PUS1Q9Y606 427 aaKnown RBP eCLIP3.3□□□□□ -1.88
CCDC54-201ENST00000261058 NPATQ14207 1427 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 CDHR2Q9BYE9 1310 aa3.3□□□□□ -1.88
CCDC54-201ENST00000261058 A0A1W2PNV4 684 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 SMCO3A2RU48 225 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 LRRC30A6NM36 301 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 WASHC1A8K0Z3 465 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 EFCAB7A8K855 629 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 A8MX80 341 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 C2orf74A8MZ97 194 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 G3V3Y1 287 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 TPST2O60704 377 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 NOL4O94818 638 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 ANXA5P08758 320 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 SDC1P18827 310 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 TSPAN8P19075 237 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 GSTM3P21266 225 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 LAP3P28838 519 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 CASP14P31944 242 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 KIR3DL2P43630 455 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 EMDP50402 254 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 CDH17Q12864 832 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 IL18R1Q13478 541 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 SLC10A1Q14973 349 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 CAMK4Q16566 473 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 ZCWPW2Q504Y3 356 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 SBK1Q52WX2 424 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 YIF1BQ5BJH7 314 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 BEX5Q5H9J7 111 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 MARCH8Q5T0T0 291 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 CCNJQ5T5M9 372 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 NDUFAF7Q7L592 441 aa3.29□□□□□ -1.88
CCDC54-201ENST00000261058 H2BFWTQ7Z2G1 175 aa3.29□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 89.4 ms