RNA–Protein interactions for RNA: ENST00000257552.6

MSI1-201, Transcript of musashi RNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSI1, Length 2,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1-201ENST00000257552 DUXAA6NLW8 204 aa13.5□□□□□ -0.25
MSI1-201ENST00000257552 PRSS44E7EML9 344 aa13.5□□□□□ -0.25
MSI1-201ENST00000257552 C1QTNF3-AMACRE9PGA6 284 aa13.5□□□□□ -0.25
MSI1-201ENST00000257552 SULT1B1O43704 296 aa13.5□□□□□ -0.25
MSI1-201ENST00000257552 IFNGP01579 166 aa13.5□□□□□ -0.25
MSI1-201ENST00000257552 RPN2P04844 631 aa13.5□□□□□ -0.25
MSI1-201ENST00000257552 OR2T7P0C7T2 308 aa13.5□□□□□ -0.25
MSI1-201ENST00000257552 SNRPNP63162 240 aaKnown RBP13.5□□□□□ -0.25
MSI1-201ENST00000257552 PRDX1Q06830 199 aaKnown RBP13.5□□□□□ -0.25
MSI1-201ENST00000257552 HFEQ30201 348 aa13.5□□□□□ -0.25
MSI1-201ENST00000257552 OR2T27Q8NH04 317 aa13.5□□□□□ -0.25
MSI1-201ENST00000257552 RGP1Q92546 391 aaPredicted RBP13.5□□□□□ -0.25
MSI1-201ENST00000257552 LINC00615Q96LM1 132 aaPredicted RBP13.5□□□□□ -0.25
MSI1-201ENST00000257552 ZNF681Q96N22 645 aa13.5□□□□□ -0.25
MSI1-201ENST00000257552 PTCHD1Q96NR3 888 aa13.5□□□□□ -0.25
MSI1-201ENST00000257552 MYADMQ96S97 322 aa13.5□□□□□ -0.25
MSI1-201ENST00000257552 CMSS1Q9BQ75 279 aaKnown RBP13.5□□□□□ -0.25
MSI1-201ENST00000257552 UTP23Q9BRU9 249 aaKnown RBP13.5□□□□□ -0.25
MSI1-201ENST00000257552 BARX1Q9HBU1 254 aaPredicted RBP13.5□□□□□ -0.25
MSI1-201ENST00000257552 KCNK6Q9Y257 313 aa13.5□□□□□ -0.25
MSI1-201ENST00000257552 RPA2P15927 270 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 AK4P27144 223 aaPredicted RBP13.49□□□□□ -0.25
MSI1-201ENST00000257552 FAUP35544 74 aaKnown RBP13.49□□□□□ -0.25
MSI1-201ENST00000257552 KCNJ3P48549 501 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 RAB13P51153 203 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 SCRN3Q0VDG4 424 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 CMTM3Q96MX0 182 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 PCBD2Q9H0N5 130 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 COA4Q9NYJ1 87 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 HAO2Q9NYQ3 351 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 NDRG3Q9UGV2 375 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 KCNE5Q9UJ90 142 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 PLXNA2O75051 1894 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 A0A1B0GTH9 108 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 RAB40ALP0C0E4 278 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 SLC35G4P0C7Q5 338 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 ADRA2CP18825 462 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 PON3Q15166 354 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 TAF13Q15543 124 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 MANEAQ5SRI9 462 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 UNQ9370/PRO34162Q6UXP9 181 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 STAC2Q6ZMT1 411 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 RNF113BQ8IZP6 322 aaKnown RBP13.49□□□□□ -0.25
MSI1-201ENST00000257552 BEST3Q8N1M1 668 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 OR2A1Q8NGT9 310 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 RAB40AQ8WXH6 277 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 MIB2Q96AX9 1013 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 SEC22AQ96IW7 307 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 NMNAT3Q96T66 252 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 KCNK15Q9H427 330 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 ASF1BQ9NVP2 202 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 GPR34Q9UPC5 381 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 ZNF281Q9Y2X9 895 aa13.49□□□□□ -0.25
MSI1-201ENST00000257552 RFPL4AA6NLU0 287 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 RFPL4AL1F8VTS6 287 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 NARSO43776 548 aaKnown RBP13.48□□□□□ -0.25
MSI1-201ENST00000257552 CD3DP04234 171 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 LIPCP11150 499 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 ERGP11308 486 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 MGMTP16455 207 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 CDK3Q00526 305 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 POU4F2Q12837 409 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 ARHGAP19Q14CB8 494 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 TRMT12Q53H54 448 aaKnown RBP13.48□□□□□ -0.25
MSI1-201ENST00000257552 TMEM31Q5JXX7 168 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 TMPRSS11FQ6ZWK6 438 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 OR2W3Q7Z3T1 314 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 DND1Q8IYX4 353 aaKnown RBP13.48□□□□□ -0.25
MSI1-201ENST00000257552 SYS1Q8N2H4 156 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 KCT2Q8NC54 265 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 OR1S2Q8NGQ3 325 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 ZPLD1Q8TCW7 415 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 SPTBP11277 2137 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 KANTRA0A1W2PQU2 76 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 PRR32B1ATL7 298 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 CCSO14618 274 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 GLSO94925 669 aaPredicted RBP13.48□□□□□ -0.25
MSI1-201ENST00000257552 LYPD3O95274 346 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 GP1BAP07359 652 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 UBBP0CG47 229 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 UBCP0CG48 685 aaKnown RBP13.48□□□□□ -0.25
MSI1-201ENST00000257552 MEOX2P50222 304 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 MECP2P51608 486 aaKnown RBP13.48□□□□□ -0.25
MSI1-201ENST00000257552 EFNB2P52799 333 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 RPS27AP62979 156 aaKnown RBP13.48□□□□□ -0.25
MSI1-201ENST00000257552 UBA52P62987 128 aaKnown RBP13.48□□□□□ -0.25
MSI1-201ENST00000257552 LTBQ06643 244 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 CST6Q15828 149 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 TMEM35AQ53FP2 167 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 EIPR1Q53HC9 387 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 RPL13AP3Q6NVV1 102 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 NDUFAF7Q7L592 441 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 RAB11FIP2Q7L804 512 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 SHISA5Q8N114 240 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 SLC2A12Q8TD20 617 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 POFUT1Q9H488 388 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 MRPS30Q9NP92 439 aaKnown RBP13.48□□□□□ -0.25
MSI1-201ENST00000257552 APOBEC3BQ9UH17 382 aaKnown RBP13.48□□□□□ -0.25
MSI1-201ENST00000257552 PCDHB10Q9UN67 800 aa13.48□□□□□ -0.25
MSI1-201ENST00000257552 VPS13AQ96RL7 3174 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms