RNA–Protein interactions for RNA: ENST00000249014.4

CDC42EP1-201, Transcript of CDC42 effector protein 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDC42EP1, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP1-201ENST00000249014 ABHD16AO95870 558 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 ANKRD34CP0C6C1 535 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 RPS27P42677 84 aaKnown RBP17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 UBXN2BQ14CS0 331 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 C6orf183Q5T699 404 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 STPG1Q5TH74 334 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 CDC20BQ86Y33 519 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 ZNF433Q8N7K0 673 aaPredicted RBP17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 CADM4Q8NFZ8 388 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 C1orf216Q8TAB5 229 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 MVB12AQ96EY5 273 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 DPAGT1Q9H3H5 408 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 SLA2Q9H6Q3 261 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 NIPAL2Q9H841 368 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 FRRS1LQ9P0K9 344 aa17.73■□□□□ 0.43
CDC42EP1-201ENST00000249014 PIAS2O75928 621 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 GPANK1O95872 356 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 TCRBP04435 133 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 FOLR1P15328 257 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 SDHBP21912 280 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 GIFP27352 417 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 IL12BP29460 328 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 NSDHLQ15738 373 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 SLC6A19Q695T7 634 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 CEP76Q8TAP6 659 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 SCMH1Q96GD3 660 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 WDR76Q9H967 626 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 A0A1B0GTH9 108 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 AIPO00170 330 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 KHNYNO15037 678 aaKnown RBP17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 TSPAN2O60636 221 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 AKR7A3O95154 331 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 MYF5P13349 255 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 DPP4P27487 766 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 ARL4DP49703 201 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 CCR6P51684 374 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 CLDN12P56749 244 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 MRPL28Q13084 256 aaKnown RBP17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 MAB21L1Q13394 359 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 TNK1Q13470 666 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 EMC4Q5J8M3 183 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 SLC25A38Q96DW6 304 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 FOXQ1Q9C009 403 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 SYT4Q9H2B2 425 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 GHITMQ9H3K2 345 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 FKRPQ9H9S5 495 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 C12orf10Q9HB07 376 aa17.72■□□□□ 0.43
CDC42EP1-201ENST00000249014 C7orf66A4D0T2 115 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 ANKRD61A6NGH8 418 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 GSTZ1O43708 216 aaPredicted RBP17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 BGLAPP02818 100 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 HIST1H2ABP04908 130 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 TACSTD2P09758 323 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 ITPKBP27987 946 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 CSF2RBP32927 897 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 SLC6A8P48029 635 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 SMAD4Q13485 552 aaKnown RBP17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 ALKBH1Q13686 389 aaKnown RBP17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 FCN2Q15485 313 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 C1orf189Q5VU69 101 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 HIST3H2AQ7L7L0 130 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 NUP54Q7Z3B4 507 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 FAM220AQ7Z4H9 259 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 KCTD20Q7Z5Y7 419 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 SMIM4Q8WVI0 70 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 GCDHQ92947 438 aaPredicted RBP17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 HIST1H2ACQ93077 130 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 TAS2R5Q9NYW4 299 aa17.71■□□□□ 0.43
CDC42EP1-201ENST00000249014 PDCD5O14737 125 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 CTDSPLO15194 276 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 NDUFB5O43674 189 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 KLF9Q13886 244 aaPredicted RBP17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 FAM205BPQ63HN1 556 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 BAIAP2L2Q6UXY1 529 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 OR6N2Q8NGY6 317 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 OR2T4Q8NH00 348 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 OR5AK2Q8NH90 309 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 ADAMTS14Q8WXS8 1223 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 CMTM3Q96MX0 182 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 WWTR1Q9GZV5 400 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 LIN7BQ9HAP6 207 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 ZNF304Q9HCX3 659 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 NUBP2Q9Y5Y2 271 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 V9GY05 133 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 SDK1Q7Z5N4 2213 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 TRABD2BA6NFA1 517 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 DHFRP00374 187 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 MT-ND4P03905 459 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 PRKCAP17252 672 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 FBLP22087 321 aaKnown RBP17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 CXCR1P25024 350 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 DCAF7P61962 342 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 EEF1A1P5Q5VTE0 462 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 FCRLAQ7L513 359 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 DPY19L4Q7Z388 723 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 PM20D2Q8IYS1 436 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 D2HGDHQ8N465 521 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 GTPBP2Q9BX10 602 aaKnown RBP17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 CACNG6Q9BXT2 260 aa17.7■□□□□ 0.42
CDC42EP1-201ENST00000249014 TTYH1Q9H313 450 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms