RNA–Protein interactions for RNA: ENST00000248139.7

RAB40C-201, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB40C, Length 2,699 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-201ENST00000248139 PTPMT1Q8WUK0 201 aaPredicted RBP23.23■■□□□ 1.31
RAB40C-201ENST00000248139 ATOH1Q92858 354 aaPredicted RBP23.23■■□□□ 1.31
RAB40C-201ENST00000248139 AMELYQ99218 206 aa23.23■■□□□ 1.31
RAB40C-201ENST00000248139 SEC22CQ9BRL7 303 aa23.23■■□□□ 1.31
RAB40C-201ENST00000248139 SYT4Q9H2B2 425 aa23.23■■□□□ 1.31
RAB40C-201ENST00000248139 MSRAQ9UJ68 235 aa23.23■■□□□ 1.31
RAB40C-201ENST00000248139 TRAV8-7A0A075B6U6 113 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 KHDRBS3O75525 346 aaKnown RBP23.22■■□□□ 1.31
RAB40C-201ENST00000248139 PROS1P07225 676 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 TACR3P29371 465 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 DCTDP32321 178 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 CAPZA2P47755 286 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 SLC35D3Q5M8T2 416 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 OR8H3Q8N146 312 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 LRRC75AQ8NAA5 344 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 THEM6Q8WUY1 208 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 TAAR8Q969N4 342 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 WDR89Q96FK6 387 aaPredicted RBP23.22■■□□□ 1.31
RAB40C-201ENST00000248139 SRPX2O60687 465 aaPredicted RBP23.22■■□□□ 1.31
RAB40C-201ENST00000248139 UTS2O95399 124 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 CDK2P24941 298 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 PTH2RP49190 550 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 PSMD4P55036 377 aaKnown RBP23.22■■□□□ 1.31
RAB40C-201ENST00000248139 PER3P56645 1201 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 CAMK2DQ13557 499 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 PWWP2BQ6NUJ5 590 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 LMX1AQ8TE12 382 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 TSPAN32Q96QS1 320 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 SLC38A3Q99624 504 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 DPCDQ9BVM2 203 aaPredicted RBP23.22■■□□□ 1.31
RAB40C-201ENST00000248139 KCNK15Q9H427 330 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 METTL17Q9H7H0 456 aaPredicted RBP23.22■■□□□ 1.31
RAB40C-201ENST00000248139 TCF7L1Q9HCS4 588 aa23.22■■□□□ 1.31
RAB40C-201ENST00000248139 ARPC1BO15143 372 aaKnown RBP23.21■■□□□ 1.31
RAB40C-201ENST00000248139 GPRIN2O60269 458 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 SDC3O75056 442 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 IFI6P09912 130 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 LGALSLQ3ZCW2 172 aaPredicted RBP23.21■■□□□ 1.31
RAB40C-201ENST00000248139 HACD4Q5VWC8 232 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 TTLL10Q6ZVT0 673 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 ZNF767PQ75MW2 155 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 LUZP2Q86TE4 346 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 OR5AK2Q8NH90 309 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 PPP1R14AQ96A00 147 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 UBQLN4Q9NRR5 601 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 DHCR7Q9UBM7 475 aaKnown RBP23.21■■□□□ 1.31
RAB40C-201ENST00000248139 GRHPRQ9UBQ7 328 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 GMEB2Q9UKD1 530 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 HIF3AQ9Y2N7 669 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 SCDO00767 359 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 FBXO45P0C2W1 286 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 CAMK2BQ13554 666 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 ZBTB37Q5TC79 503 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 TMPRSS12Q86WS5 348 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 CMIPQ8IY22 773 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 EXD3Q8N9H8 876 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 GPR137Q96N19 417 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 DLL4Q9NR61 685 aa23.21■■□□□ 1.31
RAB40C-201ENST00000248139 EIF3KQ9UBQ5 218 aaKnown RBP23.21■■□□□ 1.31
RAB40C-201ENST00000248139 GSTZ1O43708 216 aaPredicted RBP23.2■■□□□ 1.3
RAB40C-201ENST00000248139 ZNF81P51508 661 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 P2RX3P56373 397 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 CPEB4Q17RY0 729 aaKnown RBP eCLIP23.2■■□□□ 1.3
RAB40C-201ENST00000248139 TMEM69Q5SWH9 247 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 FNDC7Q5VTL7 733 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 SLC43A2Q8N370 569 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 OR56B4Q8NH76 319 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 TCTN2Q96GX1 697 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 LRFN5Q96NI6 719 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 FOXJ3Q9UPW0 622 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 FKBP7Q9Y680 259 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 TNFRSF10AO00220 468 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 NOS1APO75052 506 aaPredicted RBP23.2■■□□□ 1.3
RAB40C-201ENST00000248139 ICOSLGO75144 302 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 DNASE1P24855 282 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 ITPKBP27987 946 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 SDHAP31040 664 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 RAD52P43351 418 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 SLC22A10Q63ZE4 541 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 SLC25A25Q6KCM7 469 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 TEX261Q6UWH6 196 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 SLC16A9Q7RTY1 509 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 PM20D2Q8IYS1 436 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 ZNF680Q8NEM1 530 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 OR2T35Q8NGX2 323 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 RANBP3Q9H6Z4 567 aaPredicted RBP23.2■■□□□ 1.3
RAB40C-201ENST00000248139 LAMP5Q9UJQ1 280 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 U3KQ87 197 aa23.2■■□□□ 1.3
RAB40C-201ENST00000248139 VPS13AQ96RL7 3174 aa23.19■■□□□ 1.3
RAB40C-201ENST00000248139 UNC13CQ8NB66 2214 aa23.19■■□□□ 1.3
RAB40C-201ENST00000248139 A0A1W2PQ72 361 aa23.19■■□□□ 1.3
RAB40C-201ENST00000248139 ZNF264O43296 627 aa23.19■■□□□ 1.3
RAB40C-201ENST00000248139 SULT1A3P0DMM9 295 aa23.19■■□□□ 1.3
RAB40C-201ENST00000248139 SULT1A4P0DMN0 295 aa23.19■■□□□ 1.3
RAB40C-201ENST00000248139 CAPZBP47756 277 aa23.19■■□□□ 1.3
RAB40C-201ENST00000248139 CENPAP49450 140 aa23.19■■□□□ 1.3
RAB40C-201ENST00000248139 EFNA3P52797 238 aa23.19■■□□□ 1.3
RAB40C-201ENST00000248139 SLC37A1P57057 533 aa23.19■■□□□ 1.3
RAB40C-201ENST00000248139 ALKBH1Q13686 389 aaKnown RBP23.19■■□□□ 1.3
RAB40C-201ENST00000248139 SLC35D2Q76EJ3 337 aa23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms