RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 SGCBQ16585 318 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 NTRK2Q16620 822 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 B3GNTL1Q67FW5 361 aaPredicted RBP21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 RPTNQ6XPR3 784 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 MAMDC2Q7Z304 686 aaPredicted RBP21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 GPALPP1Q8IXQ4 340 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 OR6K6Q8NGW6 343 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 SLC22A8Q8TCC7 542 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 STK35Q8TDR2 534 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 TMEM234Q8WY98 164 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 ST8SIA1Q92185 356 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 SPACA9Q96E40 222 aaPredicted RBP21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 COQ7Q99807 217 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 ASCL3Q9NQ33 180 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 PLEKHB1Q9UF11 243 aaPredicted RBP21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 GSTK1Q9Y2Q3 226 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 SMIM30A4D0T7 59 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 CD8B2A6NJW9 211 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 CD8BP10966 210 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 CD40LGP29965 261 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 NHLH1Q02575 133 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 HNRNPA0Q13151 305 aaKnown RBP21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 EMC4Q5J8M3 183 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 DCDC5Q6ZRR9 648 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 CCDC190Q86UF4 302 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 PARP16Q8N5Y8 322 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 ALG12Q9BV10 488 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 VDAC3Q9Y277 283 aa21.06■□□□□ 0.96
SYNGR3-201ENST00000248121 MED13Q9UHV7 2174 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 C11orf98E9PRG8 122 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 GAAP10253 952 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 ETV6P41212 452 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 HTR3AP46098 478 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 SRSF6Q13247 344 aaKnown RBP21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 TP53I3Q53FA7 332 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 ZNF468Q5VIY5 522 aaPredicted RBP21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 TUBA3EQ6PEY2 450 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 IL20RBQ6UXL0 311 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 CHPT1Q8WUD6 406 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 GPR87Q9BY21 358 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 GRIP1Q9Y3R0 1128 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 IQCMA0A1B0GVH7 501 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 FTCDNL1E5RQL4 147 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 PLPP2O43688 288 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 DXOO77932 396 aaKnown RBP21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 HPP00738 406 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 GRPRP30550 384 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 ARL9Q6T311 187 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 CENPSQ8N2Z9 138 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 ZNF511Q8NB15 262 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 ADAMTS17Q8TE56 1095 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 CRNNQ9UBG3 495 aaPredicted RBP21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 WIF1Q9Y5W5 379 aa21.05■□□□□ 0.96
SYNGR3-201ENST00000248121 IGLV3-32A0A0A0MS00 114 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 ETV2O00321 342 aaPredicted RBP21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 IL11P20809 199 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 FOXF1Q12946 379 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 RGS21Q2M5E4 152 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 CDONQ4KMG0 1287 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 ATP1A1-AS1Q5TC04 95 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 PRAMEF20Q5VT98 475 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 GPR139Q6DWJ6 353 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 DTX1Q86Y01 620 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 IL22RA1Q8N6P7 574 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 ADAMTS14Q8WXS8 1223 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 PGLYRP3Q96LB9 341 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 WDR70Q9NW82 654 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 PPP4R1LQ9P1A2 415 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 ST6GALNAC2Q9UJ37 374 aa21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 CHCHD2Q9Y6H1 151 aaPredicted RBP21.04■□□□□ 0.96
SYNGR3-201ENST00000248121 SHISA8B8ZZ34 492 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 GALP22466 123 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 TNFSF8P32971 234 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 CASP3P42574 277 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 CAV3P56539 151 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 ZNF45Q02386 682 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 SLC6A19Q695T7 634 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 DMKNQ6E0U4 476 aaPredicted RBP21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 OR6V1Q8N148 313 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 PELI1Q96FA3 418 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 ARL5BQ96KC2 179 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 METTL7AQ9H8H3 244 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 ANKRD10Q9NXR5 420 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 POLHQ9Y253 713 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 PRR32B1ATL7 298 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 EFNA2O43921 213 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 AHSA1O95433 338 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 MLF1P58340 268 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 RPS19BP1Q86WX3 136 aaKnown RBP21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 SYS1Q8N2H4 156 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 ZNF417Q8TAU3 575 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 ZNF587Q96SQ5 575 aaPredicted RBP21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 PPIL3Q9H2H8 161 aaKnown RBP21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 SRA1Q9HD15 236 aaKnown RBP21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 INIPQ9NRY2 104 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 PCDHGB7Q9Y5F8 929 aa21.03■□□□□ 0.96
SYNGR3-201ENST00000248121 PLPP3O14495 311 aa21.02■□□□□ 0.96
SYNGR3-201ENST00000248121 RGS9O75916 674 aaPredicted RBP21.02■□□□□ 0.96
SYNGR3-201ENST00000248121 PLGP00747 810 aaPredicted RBP21.02■□□□□ 0.96
SYNGR3-201ENST00000248121 NEIL3Q8TAT5 605 aa21.02■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms