RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 DUSP5Q16690 384 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 PRAMEF20Q5VT98 475 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 RPL22L1Q6P5R6 122 aaKnown RBP8.54□□□□□ -1.04
COL21A1-201ENST00000244728 TSSK4Q6SA08 328 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 PLPP6Q8IY26 295 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 SIRT6Q8N6T7 355 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 HAVCR1Q96D42 359 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 ELF4Q99607 663 aaPredicted RBP8.54□□□□□ -1.04
COL21A1-201ENST00000244728 CST11Q9H112 138 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 OR52A5Q9H2C5 316 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 DHDHQ9UQ10 334 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 BRWD3Q6RI45 1802 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 IGLV3-16A0A075B6K0 115 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 KDM4EB2RXH2 506 aaPredicted RBP8.54□□□□□ -1.04
COL21A1-201ENST00000244728 M0R036 132 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 ZNF593O00488 134 aaPredicted RBP8.54□□□□□ -1.04
COL21A1-201ENST00000244728 GCM2O75603 506 aaPredicted RBP8.54□□□□□ -1.04
COL21A1-201ENST00000244728 PRH1P02810 166 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 SEMG1P04279 462 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 CXCL3P19876 107 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 DUSP3P51452 185 aaPredicted RBP8.54□□□□□ -1.04
COL21A1-201ENST00000244728 CDK5Q00535 292 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 ULK3Q6PHR2 472 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 PRSS42Q7Z5A4 293 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 ARL14Q8N4G2 192 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 OR6M1Q8NGM8 313 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 OR2A1Q8NGT9 310 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 PFN4Q8NHR9 129 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 ST8SIA2Q92186 375 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 WASH6PQ9NQA3 447 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 TMEM14AQ9Y6G1 99 aa8.54□□□□□ -1.04
COL21A1-201ENST00000244728 CEACAM5P06731 702 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 CSF1P09603 554 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 RAB40ALP0C0E4 278 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 AKAIN1P0CW23 69 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 OR8G3PP0DMU2 310 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ZNF43P17038 809 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 SLC6A1P30531 599 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 PRKAR1BP31321 381 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 DLSTP36957 453 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 UBE2MP61081 183 aaKnown RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 EIF5AP63241 154 aaKnown RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ACY1Q03154 408 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 LTBQ06643 244 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 RBMS2Q15434 407 aaKnown RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 RAB11BQ15907 218 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 RNASE10Q5GAN6 216 aaKnown RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 EIF5AL1Q6IS14 154 aaKnown RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 NIPAL3Q6P499 406 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 SLC35D2Q76EJ3 337 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 C12orf45Q8N5I9 185 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 OR4Q3Q8NH05 313 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 SCARB1Q8WTV0 552 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 RAB40AQ8WXH6 277 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 SENP5Q96HI0 755 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ABHD1Q96SE0 405 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 FN3KQ9H479 309 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 LIN7BQ9HAP6 207 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 WSB2Q9NYS7 404 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 HRH3Q9Y5N1 445 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ZNF638Q14966 1978 aaKnown RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 CASP8AP2Q9UKL3 1982 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ACSM4P0C7M7 580 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 BSGP35613 385 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 POU3F4P49335 361 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 RIDAP52758 137 aaKnown RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 MVDP53602 400 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 RPS15P62841 145 aaKnown RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 MESP2Q0VG99 397 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ST3GAL2Q16842 350 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 NLRC3Q7RTR2 1065 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 GLB1L2Q8IW92 636 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ZSCAN1Q8NBB4 408 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ORAI1Q96D31 301 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 PLA2G2FQ9BZM2 168 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 AGAP14A8MT82 685 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 F5H5K5 113 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 GPRIN2O60269 458 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 SRPX2O60687 465 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 AKR1C4P17516 323 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 VASPP50552 380 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 DPTQ07507 201 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 TMUB2Q71RG4 321 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 OR4D11Q8NGI4 311 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 FAM71F1Q96KD3 344 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 PITHD1Q9GZP4 211 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ANKRD19PQ9H560 264 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 UBQLN4Q9NRR5 601 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ICKQ9UPZ9 632 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ZNF281Q9Y2X9 895 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 SIT1Q9Y3P8 196 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 NEUROG3Q9Y4Z2 214 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 EP400Q96L91 3159 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 A0A1B0GWA3 101 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 SERTM1A2A2V5 107 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ZNF208O43345 1280 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 MAKP20794 623 aa8.53□□□□□ -1.04
COL21A1-201ENST00000244728 SEC61A1P61619 476 aaKnown RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 ZNF169Q14929 603 aaPredicted RBP8.53□□□□□ -1.04
COL21A1-201ENST00000244728 Q5BKY6 102 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms