RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 PPP3R1P63098 170 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 ACKR1Q16570 336 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 BTBD16Q32M84 506 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 ZNF519Q8TB69 540 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 RASL10BQ96S79 203 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 SYT4Q9H2B2 425 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 WDR70Q9NW82 654 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 BDP1A6H8Y1 2624 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 IGHV1-45A0A0A0MS14 117 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 FABP12A6NFH5 140 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 ETV2O00321 342 aaPredicted RBP16.69■□□□□ 0.26
HOXC11-201ENST00000243082 PLGP00747 810 aaPredicted RBP16.69■□□□□ 0.26
HOXC11-201ENST00000243082 CD1AP06126 327 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 ZNF883P0CG24 379 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 CFL1P23528 166 aaKnown RBP16.69■□□□□ 0.26
HOXC11-201ENST00000243082 PSMB10P40306 273 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 APOBEC1P41238 236 aaKnown RBP16.69■□□□□ 0.26
HOXC11-201ENST00000243082 RPL27P61353 136 aaKnown RBP16.69■□□□□ 0.26
HOXC11-201ENST00000243082 BAK1Q16611 211 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 NTRK2Q16620 822 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 CCDC58Q4VC31 144 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 SLC6A19Q695T7 634 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 FAM131AQ6UXB0 335 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 PM20D2Q8IYS1 436 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 OR8H2Q8N162 312 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 TEX19Q8NA77 164 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 OR6S1Q8NH40 331 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 ZNF417Q8TAU3 575 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 SLC22A8Q8TCC7 542 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 RNF166Q96A37 237 aaPredicted RBP16.69■□□□□ 0.26
HOXC11-201ENST00000243082 MRPL48Q96GC5 212 aaKnown RBP16.69■□□□□ 0.26
HOXC11-201ENST00000243082 ZNF587Q96SQ5 575 aaPredicted RBP16.69■□□□□ 0.26
HOXC11-201ENST00000243082 SLC39A1Q9NY26 324 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 VDAC3Q9Y277 283 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 KLHDC2Q9Y2U9 406 aa16.69■□□□□ 0.26
HOXC11-201ENST00000243082 PTRH2Q9Y3E5 179 aaKnown RBP16.69■□□□□ 0.26
HOXC11-201ENST00000243082 ALPK2Q86TB3 2170 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 TVP23AA6NH52 213 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 HPGDSO60760 199 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 PTTG1O95997 202 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 IL11P20809 199 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 AZGP1P25311 298 aaKnown RBP16.68■□□□□ 0.26
HOXC11-201ENST00000243082 RPS11P62280 158 aaKnown RBP eCLIP16.68■□□□□ 0.26
HOXC11-201ENST00000243082 XKRXQ6PP77 449 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 CDC20BQ86Y33 519 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 HTRA1Q92743 480 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 ARL5BQ96KC2 179 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 IMMP1LQ96LU5 166 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 TXNIPQ9H3M7 391 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 CPNE5Q9HCH3 593 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 TIGARQ9NQ88 270 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 MRPL39Q9NYK5 338 aaKnown RBP16.68■□□□□ 0.26
HOXC11-201ENST00000243082 PPP4R1LQ9P1A2 415 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 B3GALT1Q9Y5Z6 326 aa16.68■□□□□ 0.26
HOXC11-201ENST00000243082 IGLV3-32A0A0A0MS00 114 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 TRBV2A0A0J9YWF9 115 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 PSMD9O00233 223 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 CELA2AP08217 269 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 SPNP16150 400 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 EDNRAP25101 427 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 CCKBRP32239 447 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 FOXF1Q12946 379 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 GDPD3Q7L5L3 318 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 RPS4Y2Q8TD47 263 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 RHBDD1Q8TEB9 315 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 SPACA9Q96E40 222 aaPredicted RBP16.67■□□□□ 0.26
HOXC11-201ENST00000243082 SOSTQ9BQB4 213 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 ZNF700Q9H0M5 742 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 TBC1D24Q9ULP9 559 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 PCDHGB2Q9Y5G2 931 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 WIF1Q9Y5W5 379 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 COL27A1Q8IZC6 1860 aaPredicted RBP16.67■□□□□ 0.26
HOXC11-201ENST00000243082 C9J4A7 227 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 XKRYO14609 159 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 AKR7A3O95154 331 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 IGHMP01871 453 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 COX6A1P12074 109 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 MSX1P28360 303 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 AGAP7PQ5VUJ5 663 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 TPRA1Q86W33 373 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 ADAD1Q96M93 576 aaKnown RBP16.67■□□□□ 0.26
HOXC11-201ENST00000243082 PDCD1LG2Q9BQ51 273 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 NEURL2Q9BR09 285 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 METTL7AQ9H8H3 244 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 HS3ST3B1Q9Y662 390 aa16.67■□□□□ 0.26
HOXC11-201ENST00000243082 KIF26BQ2KJY2 2108 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 CPAMD8Q8IZJ3 1885 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 A0A0G2JK05 382 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 PRSS37A4D1T9 235 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 B4E171 279 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 SHISA8B8ZZ34 492 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 EFNA2O43921 213 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 OR6A2O95222 327 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 GPANK1O95872 356 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 SERPINA3P01011 423 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 IL7P13232 177 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 MYL9P24844 172 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 TSPAN7P41732 249 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 CASP3P42574 277 aa16.66■□□□□ 0.26
HOXC11-201ENST00000243082 DEFA1P59665 94 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 1253.9 ms