RNA–Protein interactions for RNA: ENST00000233468.4

SF3B6-201, Transcript of splicing factor 3b subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B6, Length 770 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-201ENST00000233468 IFI30P13284 250 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 FUT1P19526 365 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 PAX7P23759 505 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 HOXC12P31275 282 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 SLC9A3P48764 834 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 UGT2B15P54855 530 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 CLDN17P56750 224 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 FOXD4Q12950 439 aaPredicted RBP9.97□□□□□ -0.81
SF3B6-201ENST00000233468 DAZAP2Q15038 168 aaPredicted RBP9.97□□□□□ -0.81
SF3B6-201ENST00000233468 FGD3Q5JSP0 725 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 FBXW10Q5XX13 1052 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 STAC2Q6ZMT1 411 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 MBOAT2Q6ZWT7 520 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 PIWIL3Q7Z3Z3 882 aaKnown RBP9.97□□□□□ -0.81
SF3B6-201ENST00000233468 TSPYL5Q86VY4 417 aaPredicted RBP9.97□□□□□ -0.81
SF3B6-201ENST00000233468 P2RY8Q86VZ1 359 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 CXorf67Q86X51 503 aaPredicted RBP9.97□□□□□ -0.81
SF3B6-201ENST00000233468 EPHX4Q8IUS5 362 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 AQP12AQ8IXF9 295 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 LIPHQ8WWY8 451 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 HSD17B8Q92506 261 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 SLC7A6OSQ96CW6 309 aaPredicted RBP9.97□□□□□ -0.81
SF3B6-201ENST00000233468 BPIFA2Q96DR5 249 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 MUCL1Q96DR8 90 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 ADAD1Q96M93 576 aaKnown RBP9.97□□□□□ -0.81
SF3B6-201ENST00000233468 MOGAT1Q96PD6 335 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 ZNF385AQ96PM9 386 aaKnown RBP9.97□□□□□ -0.81
SF3B6-201ENST00000233468 YY1AP1Q9H869 796 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 B3GAT2Q9NPZ5 323 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 MEPEQ9NQ76 525 aaPredicted RBP9.97□□□□□ -0.81
SF3B6-201ENST00000233468 TAS2R16Q9NYV7 291 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 CRIM1Q9NZV1 1036 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 RHCGQ9UBD6 479 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 MALT1Q9UDY8 824 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 TMCC3Q9ULS5 477 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 ZNF469Q96JG9 3925 aaPredicted RBP9.97□□□□□ -0.81
SF3B6-201ENST00000233468 MPDZO75970 2070 aa9.97□□□□□ -0.81
SF3B6-201ENST00000233468 A0A1W2PRG6 482 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 EFCAB9A8MZ26 197 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 ZNF587BE7ETH6 402 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 MS4A18H0YCH9 400 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 BLOC1S5-TXNDC5H3BN57 136 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 FFAR1O14842 300 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 GSC2O15499 205 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 PRSS23O95084 383 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 GADD45GO95257 159 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 PTNP21246 168 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 MPGP29372 298 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 VLDLRP98155 873 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 SPIBQ01892 262 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 POU3F1Q03052 451 aaPredicted RBP9.96□□□□□ -0.82
SF3B6-201ENST00000233468 PRKCDQ05655 676 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 LTBQ06643 244 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 FAPQ12884 760 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 FLOT2Q14254 428 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 GK3PQ14409 553 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 MS4A18Q3C1V0 323 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 NIPAL3Q6P499 406 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 PGM2L1Q6PCE3 622 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 BHLHA15Q7RTS1 189 aaPredicted RBP9.96□□□□□ -0.82
SF3B6-201ENST00000233468 ZDHHC21Q8IVQ6 265 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 NRMQ8IXM6 262 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 KDM8Q8N371 416 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 GPR137CQ8N3F9 429 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 LINC00471Q8N535 108 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 ZIC4Q8N9L1 334 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 PFN4Q8NHR9 129 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 LINC01560Q8TB33 94 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 CLPTM1LQ96KA5 538 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 LRR1Q96L50 414 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 SEPHS2Q99611 448 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 LINC00470Q9BZP3 86 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 ACTR6Q9GZN1 396 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 B3GAT1Q9P2W7 334 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 PRSS50Q9UI38 385 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 EDARQ9UNE0 448 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 AURKCQ9UQB9 309 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 TESMINQ9Y4I5 508 aa9.96□□□□□ -0.82
SF3B6-201ENST00000233468 A0A087WUU8 490 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 MCIDASD6RGH6 385 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 LRRN3E7EW58 273 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 ENTPD5O75356 428 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 BCL10O95999 233 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 SEMG1P04279 462 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 RAP2AP10114 183 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 NR2C1P13056 603 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 COX5AP20674 150 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 ATP6V1B2P21281 511 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 DAP3P51398 398 aaKnown RBP9.95□□□□□ -0.82
SF3B6-201ENST00000233468 SH3BGRP55822 239 aaPredicted RBP9.95□□□□□ -0.82
SF3B6-201ENST00000233468 PRPS1P60891 318 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 MS4A2Q01362 244 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 SNTB1Q13884 538 aaKnown RBP9.95□□□□□ -0.82
SF3B6-201ENST00000233468 HMBOX1Q6NT76 420 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 SLC46A3Q7Z3Q1 461 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 OAFQ86UD1 273 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 C17orf78Q8N4C9 275 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 FAM86B1Q8N7N1 296 aa9.95□□□□□ -0.82
SF3B6-201ENST00000233468 C1orf162Q8NEQ5 155 aaPredicted RBP9.95□□□□□ -0.82
SF3B6-201ENST00000233468 SLC7A13Q8TCU3 470 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms