RNA–Protein interactions for RNA: ENST00000228251.8

YBX3-201, Transcript of Y-box binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene YBX3, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-201ENST00000228251 OR6S1Q8NH40 331 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 OR8K3Q8NH51 312 aa17.31■□□□□ 0.36
YBX3-201ENST00000228251 ETV2O00321 342 aaPredicted RBP17.3■□□□□ 0.36
YBX3-201ENST00000228251 PIN1P1O15428 100 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 ARL6IP5O75915 188 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 NUDT14O95848 222 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 NAGAP17050 411 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 KIR2DL3P43628 341 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 FBXW4P57775 412 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 IL18Q14116 193 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 POMZP3Q6PJE2 187 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 LYPD8Q6UX82 237 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 IL20RBQ6UXL0 311 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 ZNF517Q6ZMY9 492 aaPredicted RBP17.3■□□□□ 0.36
YBX3-201ENST00000228251 EID2Q8N6I1 236 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 OR4M1Q8NGD0 313 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 PIGKQ92643 395 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 EDAQ92838 391 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 MNTQ99583 582 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 GAREM1Q9H706 876 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 APMAPQ9HDC9 416 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 EXTL2Q9UBQ6 330 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 ALPK2Q86TB3 2170 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 ANKUB1A6NFN9 424 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 NOTOA8MTQ0 251 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 AKR7A3O95154 331 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 RENP00797 406 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 CYC1P08574 325 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 EPXP11678 715 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 PSKH1P11801 424 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 ATF1P18846 271 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 GRPRP30550 384 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 EMP2P54851 167 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 SUMO3P55854 103 aaPredicted RBP17.3■□□□□ 0.36
YBX3-201ENST00000228251 C5orf46Q6UWT4 87 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 SCAIQ8N9R8 606 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 ST8SIA1Q92185 356 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 OR14A2Q96R54 314 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 NPAS1Q99742 590 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 SYT4Q9H2B2 425 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 SRA1Q9HD15 236 aaKnown RBP17.3■□□□□ 0.36
YBX3-201ENST00000228251 INIPQ9NRY2 104 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 ANKRD10Q9NXR5 420 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 HRH3Q9Y5N1 445 aa17.3■□□□□ 0.36
YBX3-201ENST00000228251 COL27A1Q8IZC6 1860 aaPredicted RBP17.29■□□□□ 0.36
YBX3-201ENST00000228251 COL6A3P12111 3177 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 A0A0G2JMP0 313 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 A0A0X1KG70 313 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 LINC00854A0A1B0GVQ3 168 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 SLC25A12O75746 678 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 ZFPL1O95159 310 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 PAHP00439 452 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 FGF5P12034 268 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 PRKCAP17252 672 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 ALOX5APP20292 161 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 RBMS1P29558 406 aaKnown RBP17.29■□□□□ 0.36
YBX3-201ENST00000228251 CLPPQ16740 277 aaPredicted RBP17.29■□□□□ 0.36
YBX3-201ENST00000228251 MRPL14Q6P1L8 145 aaKnown RBP17.29■□□□□ 0.36
YBX3-201ENST00000228251 RAB43Q86YS6 212 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 OR4M2Q8NGB6 313 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 CEP76Q8TAP6 659 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 TRMT10AQ8TBZ6 339 aaKnown RBP17.29■□□□□ 0.36
YBX3-201ENST00000228251 HSD17B8Q92506 261 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 TRIM63Q969Q1 353 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 GFI1Q99684 422 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 OCIAD1Q9NX40 245 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 MRPL39Q9NYK5 338 aaKnown RBP17.29■□□□□ 0.36
YBX3-201ENST00000228251 VSX1Q9NZR4 365 aaPredicted RBP17.29■□□□□ 0.36
YBX3-201ENST00000228251 ZNF281Q9Y2X9 895 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 A0A0C4DFX4 3053 aa17.29■□□□□ 0.36
YBX3-201ENST00000228251 TRBV11-1A0A0K0K1C0 115 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 PLPP3O14495 311 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 DKK1O94907 266 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 OR8G3PP0DMU2 310 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 RPL27P61353 136 aaKnown RBP17.28■□□□□ 0.36
YBX3-201ENST00000228251 MRPL28Q13084 256 aaKnown RBP17.28■□□□□ 0.36
YBX3-201ENST00000228251 ACKR1Q16570 336 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 YIF1BQ5BJH7 314 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 CPEB2Q7Z5Q1 589 aaKnown RBP17.28■□□□□ 0.36
YBX3-201ENST00000228251 SYT9Q86SS6 491 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 PPP1R3BQ86XI6 285 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 PM20D2Q8IYS1 436 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 SAMD12Q8N8I0 201 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 HAVCR2Q8TDQ0 301 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 METTL21AQ8WXB1 218 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 OR11A1Q9GZK7 315 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 TXNIPQ9H3M7 391 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 WDR76Q9H967 626 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 ABRACLQ9P1F3 81 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 B3GALT1Q9Y5Z6 326 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 FKBP7Q9Y680 259 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 A0A087WV48 116 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 IGLV1-36A0A0B4J1U3 117 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 A0A0B4J293 547 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 TVP23AA6NH52 213 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 FAM25AB3EWG3 89 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 FAM25CB3EWG5 89 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 FAM25GB3EWG6 89 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 PSMD9O00233 223 aa17.28■□□□□ 0.36
YBX3-201ENST00000228251 FLRT2O43155 660 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms