RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 FAM131AQ6UXB0 335 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 RPS4Y2Q8TD47 263 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 DNAJA3Q96EY1 480 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 MNTQ99583 582 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 TXNIPQ9H3M7 391 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 SDHAF3Q9NRP4 125 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 C14orf119Q9NWQ9 140 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 DMDP11532 3685 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 H7C1C5 153 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 PLPP3O14495 311 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 XKRYO14609 159 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 ARHGEF9O43307 516 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 DKK1O94907 266 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 IGHMP01871 453 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 UMODP07911 640 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 MYL9P24844 172 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 LCN6P62502 163 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 ZMAT1Q5H9K5 638 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 KCTD20Q7Z5Y7 419 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 NR2C2APQ86WQ0 139 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 ZNF519Q8TB69 540 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 SYT4Q9H2B2 425 aa26.82■■□□□ 1.88
PABPN1-201ENST00000216727 B4E171 279 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 ZNF208O43345 1280 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 KLF7O75840 302 aaPredicted RBP26.81■■□□□ 1.88
PABPN1-201ENST00000216727 PTGDSP41222 190 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 TSPAN7P41732 249 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 MAP2K6P52564 334 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 MFSD13AQ14CX5 517 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 ACKR1Q16570 336 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 HBMQ6B0K9 141 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 OR8H2Q8N162 312 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 GDPD1Q8N9F7 314 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 SETD6Q8TBK2 473 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 PMEPA1Q969W9 287 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 RASL10BQ96S79 203 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 PPP4R1LQ9P1A2 415 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 B3GALT1Q9Y5Z6 326 aa26.81■■□□□ 1.88
PABPN1-201ENST00000216727 OR6A2O95222 327 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 AHCYP23526 432 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 BTBD16Q32M84 506 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 SLC6A19Q695T7 634 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 BICRALQ6AI39 1079 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 CDC20BQ86Y33 519 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 OR10G3Q8NGC4 313 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 SPACA9Q96E40 222 aaPredicted RBP26.8■■□□□ 1.88
PABPN1-201ENST00000216727 SLC39A1Q9NY26 324 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 FRYLO94915 3013 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 IGHV1-45A0A0A0MS14 117 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 TRBV2A0A0J9YWF9 115 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 A0A1W2PRG6 482 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 GPRIN2O60269 458 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 FAM27D1Q5T7N8 215 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 TCEAL6Q6IPX3 200 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 METAP1DQ6UB28 335 aaPredicted RBP26.8■■□□□ 1.88
PABPN1-201ENST00000216727 ARSKQ6UWY0 536 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 DRAXINQ8NBI3 349 aaPredicted RBP26.8■■□□□ 1.88
PABPN1-201ENST00000216727 ZNF417Q8TAU3 575 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 HAVCR2Q8TDQ0 301 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 TCEAL3Q969E4 200 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 KCTD12Q96CX2 325 aaKnown RBP26.8■■□□□ 1.88
PABPN1-201ENST00000216727 ZNF587Q96SQ5 575 aaPredicted RBP26.8■■□□□ 1.88
PABPN1-201ENST00000216727 NPAS1Q99742 590 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 ZNF700Q9H0M5 742 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 CCDC86Q9H6F5 360 aaKnown RBP26.8■■□□□ 1.88
PABPN1-201ENST00000216727 MARCH7Q9H992 704 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 PTRH2Q9Y3E5 179 aaKnown RBP26.8■■□□□ 1.88
PABPN1-201ENST00000216727 WIF1Q9Y5W5 379 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 FKBP7Q9Y680 259 aa26.8■■□□□ 1.88
PABPN1-201ENST00000216727 EDNRAP25101 427 aa26.79■■□□□ 1.88
PABPN1-201ENST00000216727 SLC25A53Q5H9E4 307 aa26.79■■□□□ 1.88
PABPN1-201ENST00000216727 PM20D2Q8IYS1 436 aa26.79■■□□□ 1.88
PABPN1-201ENST00000216727 MFSD8Q8NHS3 518 aa26.79■■□□□ 1.88
PABPN1-201ENST00000216727 SOSTQ9BQB4 213 aa26.79■■□□□ 1.88
PABPN1-201ENST00000216727 ARRDC1-AS1Q9H2J1 176 aa26.79■■□□□ 1.88
PABPN1-201ENST00000216727 METTL7AQ9H8H3 244 aa26.79■■□□□ 1.88
PABPN1-201ENST00000216727 PRSS37A4D1T9 235 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 GATBO75879 557 aaKnown RBP26.78■■□□□ 1.88
PABPN1-201ENST00000216727 HNRNPCP07910 306 aaKnown RBP eCLIP26.78■■□□□ 1.88
PABPN1-201ENST00000216727 TACSTD2P09758 323 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 OR2Y1Q8NGV0 311 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 IMMP1LQ96LU5 166 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 VSX1Q9NZR4 365 aaPredicted RBP26.78■■□□□ 1.88
PABPN1-201ENST00000216727 TRAV1-2A0A0B4J238 106 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 PRR32B1ATL7 298 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 HPGDSO60760 199 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 PTBP1P26599 531 aaKnown RBP eCLIP26.78■■□□□ 1.88
PABPN1-201ENST00000216727 RPS11P62280 158 aaKnown RBP eCLIP26.78■■□□□ 1.88
PABPN1-201ENST00000216727 EXT1Q16394 746 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 BAK1Q16611 211 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 SCAIQ8N9R8 606 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 RHBDD1Q8TEB9 315 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 HTRA1Q92743 480 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 MRGPRX4Q96LA9 322 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 TTYH2Q9BSA4 534 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 VDAC3Q9Y277 283 aa26.78■■□□□ 1.88
PABPN1-201ENST00000216727 FLRT2O43155 660 aa26.77■■□□□ 1.88
PABPN1-201ENST00000216727 IL7P13232 177 aa26.77■■□□□ 1.88
PABPN1-201ENST00000216727 ZP4Q12836 540 aa26.77■■□□□ 1.88
PABPN1-201ENST00000216727 FOXF1Q12946 379 aa26.77■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms