RNA–Protein interactions for RNA: ENST00000201963.3

DNMT3B-201, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 1 (best) BASIC

Gene DNMT3B, Length 4,255 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-201ENST00000201963 CHRFAM7AQ494W8 412 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 ALG10Q5BKT4 473 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 DCST2Q5T1A1 773 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 ZNF620Q6ZNG0 422 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 OR10Z1Q8NGY1 313 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 C3orf49Q96BT1 292 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 ARL5BQ96KC2 179 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 ABHD1Q96SE0 405 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 DLL4Q9NR61 685 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 KCNIP3Q9Y2W7 256 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 CCDC88CQ9P219 2028 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 RLFQ13129 1914 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 RD3LP0DJH9 198 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 GP1BBP13224 206 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 ZP3P21754 424 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 SPOCK1Q08629 439 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 RBM39Q14498 530 aaKnown RBP10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 GXYLT1Q4G148 440 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 ADAM5Q6NVV9 412 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 Q6ZSR6 202 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 METTL27Q8N6F8 245 aaPredicted RBP10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 DTD2Q96FN9 168 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 LINC00052Q96N35 136 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 ZNF587Q96SQ5 575 aaPredicted RBP10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 PRRT1Q99946 306 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 MS4A7Q9GZW8 240 aaPredicted RBP10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 PIGMQ9H3S5 423 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 CKAP5Q14008 2032 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 TSPAN11A1L157 253 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 TO15178 435 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 ATG12O94817 140 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 HOXB5P09067 269 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 PTHLHP12272 177 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 CD22P20273 847 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 PDX1P52945 283 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 TNK1Q13470 666 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 SPIN3Q5JUX0 258 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 TMEM200AQ86VY9 491 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 ACBD4Q8NC06 268 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 NANPQ8TBE9 248 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 ST7LQ8TDW4 575 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 TRMT61AQ96FX7 289 aaKnown RBP10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 BTBD2Q9BX70 525 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 IFT22Q9H7X7 185 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 B3GAT2Q9NPZ5 323 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 OBP2AQ9NY56 170 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 ATG4BQ9Y4P1 393 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 CCL27Q9Y4X3 112 aa10.64□□□□□ -0.71
DNMT3B-201ENST00000201963 MEGF11A6BM72 1044 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 TTLL8A6PVC2 850 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 DPM1O60762 260 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 ZNF888P0CJ79 500 aaPredicted RBP10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 RRASP10301 218 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 NME2P22392 152 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 ITGB7P26010 798 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 SLC6A1P30531 599 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 ZFP36L2P47974 494 aaKnown RBP10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 CBFBQ13951 182 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 ZNF674Q2M3X9 581 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 TMEM196Q5HYL7 178 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 ADGRG3Q86Y34 549 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 OR2A12Q8NGT7 310 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 ZFPM2Q8WW38 1151 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 C10orf90Q96M02 699 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 LRRC3BQ96PB8 259 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 SULT4A1Q9BR01 284 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 PBDC1Q9BVG4 233 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 ARRDC1-AS1Q9H2J1 176 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 C12orf10Q9HB07 376 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 ACKR4Q9NPB9 350 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 ZNF629Q9UEG4 869 aaPredicted RBP10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 PRELID3BQ9Y3B1 194 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 TCRBV16S1A1N1A0A5B0 115 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 BCAT2O15382 392 aaPredicted RBP10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 MPIG6BO95866 241 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 ZNF28P17035 718 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 ACHEP22303 614 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 PRDX1Q06830 199 aaKnown RBP10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 SIGLEC14Q08ET2 396 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 SLC9A3R2Q15599 337 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 FAM189A2Q15884 450 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 FXNQ16595 210 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 ZNF565Q8N9K5 539 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 IL17RCQ8NAC3 791 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 OR4C15Q8NGM1 316 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 SFXN5Q8TD22 340 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 FAM83CQ9BQN1 747 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 RNF32Q9H0A6 362 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 ZNF304Q9HCX3 659 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 WNT16Q9UBV4 365 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 MMP17Q9ULZ9 603 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 TMPRSS11DO60235 418 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 FCMRO60667 390 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 F13BP05160 661 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 CHRM4P08173 479 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 HNRNPA2B1P22626 353 aaKnown RBP10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 SLC2A5P22732 501 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 CDK2P24941 298 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 BDKRB2P30411 391 aa10.63□□□□□ -0.71
DNMT3B-201ENST00000201963 SNTB1Q13884 538 aaKnown RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms