RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 ABLIM3O94929 683 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 ZNF44P15621 663 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 DAPP51397 102 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 SCGB2A2Q13296 93 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 SPCS2Q15005 226 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 TMEM52BQ4KMG9 183 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 AARDQ4LEZ3 155 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 MEX3BQ6ZN04 569 aaKnown RBP11.63□□□□□ -0.55
LMCD1-201ENST00000157600 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.63□□□□□ -0.55
LMCD1-201ENST00000157600 VRK2Q86Y07 508 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 FABP1P07148 127 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 PGGT1BP53609 377 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 SNRPD2P62316 118 aaKnown RBP11.63□□□□□ -0.55
LMCD1-201ENST00000157600 TNK1Q13470 666 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 SLC46A3Q7Z3Q1 461 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 FER1L6-AS2Q96M78 137 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 UTP23Q9BRU9 249 aaKnown RBP11.63□□□□□ -0.55
LMCD1-201ENST00000157600 ARSAP15289 507 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 ACVR1Q04771 509 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 ZNF628Q5EBL2 1059 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 DFFBO76075 338 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 STK17BO94768 372 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 LCN6P62502 163 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 B3GLCTQ6Y288 498 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 OR13C2Q8NGS9 318 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 KIRREL1Q96J84 757 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 C20orf202A1L168 122 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 LRRC30A6NM36 301 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 ZNF593O00488 134 aaPredicted RBP11.63□□□□□ -0.55
LMCD1-201ENST00000157600 GLCEO94923 617 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 SERPINA2P20848 420 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 CHRNEQ04844 493 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 GRINAQ7Z429 371 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 BPHLQ86WA6 291 aaPredicted RBP11.63□□□□□ -0.55
LMCD1-201ENST00000157600 GHSRQ92847 366 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 KCNG2Q9UJ96 466 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 RCE1Q9Y256 329 aa11.63□□□□□ -0.55
LMCD1-201ENST00000157600 SNRNP200O75643 2136 aaKnown RBP11.63□□□□□ -0.55
LMCD1-201ENST00000157600 KIR2DS1A0A191URI9 304 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 BCAT2O15382 392 aaPredicted RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 SELEP16581 610 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 GDF1P27539 372 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 APOBEC1P41238 236 aaKnown RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 KIR2DS4P43632 304 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 KIR2DS1Q14954 304 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 EXOSC7Q15024 291 aaKnown RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 P2RY14Q15391 338 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 ZNF542PQ5EBM4 170 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 ZMAT1Q5H9K5 638 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 FCRLBQ6BAA4 426 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 ABHD4Q8TB40 342 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 PRSS21Q9Y6M0 314 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 NID1P14543 1247 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 SLC14A1Q13336 389 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 KIAA1958Q8N8K9 716 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 CDCA4Q9BXL8 241 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 SSTR4P31391 388 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 ZNF93P35789 620 aaPredicted RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 RPL34P49207 117 aaKnown RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 PPT1P50897 306 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 ACSM1Q08AH1 577 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 ELAVL1Q15717 326 aaKnown RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 ENTHD1Q8IYW4 607 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 ULBP3Q9BZM4 244 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 PIGMQ9H3S5 423 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 ARHGEF17Q96PE2 2063 aaPredicted RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 CPNE6O95741 557 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 WNT11O96014 354 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 ATP1B1P05026 303 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 CNR1P21554 472 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 OR1D4P47884 311 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 SYPL1Q16563 259 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 OR7E24Q6IFN5 339 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 OVCH1Q7RTY7 1134 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 FBXO8Q9NRD0 319 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 HCFC1R1Q9NWW0 138 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 GJD2Q9UKL4 321 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 ATXN7L1Q9ULK2 861 aaPredicted RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 HOXC11O43248 304 aaPredicted RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 GJA4P35212 333 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 LSMEM2Q8N112 164 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 TMEM178AQ8NBL3 297 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 SLC30A7Q8NEW0 376 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 FRZBQ92765 325 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 SLC35A4Q96G79 324 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 OTOL1A6NHN0 477 aaPredicted RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 SORBS2O94875 1100 aaKnown RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 FCGR2AP12318 317 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 PTGER4P35408 488 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 GDNFP39905 211 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 SPOCK1Q08629 439 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 ALKBH1Q13686 389 aaKnown RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 PAQR8Q8TEZ7 354 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 RPH3AQ9Y2J0 694 aaPredicted RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 TCRBV5S1A1TA0A578 114 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 SCRG1O75711 98 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 SLC5A2P31639 672 aa11.62□□□□□ -0.55
LMCD1-201ENST00000157600 CPEB3Q8NE35 698 aaKnown RBP11.62□□□□□ -0.55
LMCD1-201ENST00000157600 C3orf49Q96BT1 292 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms