RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 SAP25Q8TEE9 199 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 PIGKQ92643 395 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 RFT1Q96AA3 541 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 CCDC74BQ96LY2 380 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 INTS14Q96SY0 518 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 KLHDC3Q9BQ90 382 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 MFRPQ9BY79 579 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 SEMA4CQ9C0C4 833 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.49□□□□□ -1.21
VAMP3-201ENST00000054666 SLITRK2Q9H156 845 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 SYT4Q9H2B2 425 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 WDR76Q9H967 626 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 BRD7Q9NPI1 651 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 SLC22A11Q9NSA0 550 aa7.49□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF346Q9UL40 294 aaKnown RBP7.49□□□□□ -1.21
VAMP3-201ENST00000054666 COLQQ9Y215 455 aaPredicted RBP7.49□□□□□ -1.21
VAMP3-201ENST00000054666 A0A0G2JMP0 313 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 IGHV5-10-1A0A0J9YXX1 117 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 A0A0X1KG70 313 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 A0A1W2PPK0 400 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 A0A1W2PQM1 296 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 C4orf47A7E2U8 309 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 HSPB2A8KAH6 182 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 C17orf51A8MQB3 221 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 B4DXG7 233 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 PLA2G10O15496 165 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 RPP14O95059 124 aaKnown RBP7.48□□□□□ -1.21
VAMP3-201ENST00000054666 HLA-DQA2P01906 255 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 OR8G3PP0DMU2 310 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 CENPAP49450 140 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 BLVRAP53004 296 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 RPL27P61353 136 aaKnown RBP7.48□□□□□ -1.21
VAMP3-201ENST00000054666 EGR3Q06889 387 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 C17orf67Q0P5P2 114 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 HSPB2Q16082 182 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 HLA-BQ31612 363 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 SLC25A35Q3KQZ1 300 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 PHF19Q5T6S3 580 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 EEF1A1P5Q5VTE0 462 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 HACD4Q5VWC8 232 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 PWWP2BQ6NUJ5 590 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 BAIAP2L2Q6UXY1 529 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 Q7L0L9 218 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 WDR5BQ86VZ2 330 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 CDC20BQ86Y33 519 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 TIGD4Q8IY51 512 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 APCDD1LQ8NCL9 501 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 OR4M2Q8NGB6 313 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 RPS4Y2Q8TD47 263 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 GPR119Q8TDV5 335 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 DUSP19Q8WTR2 217 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 THAP3Q8WTV1 239 aaPredicted RBP7.48□□□□□ -1.21
VAMP3-201ENST00000054666 ST8SIA1Q92185 356 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF524Q96C55 264 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 DNAJA3Q96EY1 480 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 ZC3HAV1LQ96H79 300 aaKnown RBP7.48□□□□□ -1.21
VAMP3-201ENST00000054666 SNX18Q96RF0 628 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 WACQ9BTA9 647 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 CRB3Q9BUF7 120 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 COMMD4Q9H0A8 199 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 MOV10Q9HCE1 1003 aaKnown RBP7.48□□□□□ -1.21
VAMP3-201ENST00000054666 PILRBQ9UKJ0 227 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 PI4KAP42356 2102 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 ANKUB1A6NFN9 424 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 ANKRD61A6NGH8 418 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 TVP23AA6NH52 213 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 FZD7O75084 574 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 TIAF1O95411 115 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 PAHP00439 452 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 PLGP00747 810 aaPredicted RBP7.48□□□□□ -1.21
VAMP3-201ENST00000054666 EPXP11678 715 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 CCKBRP32239 447 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 NR4A2P43354 598 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 FBXW4P57775 412 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 FOXL2P58012 376 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 RPS11P62280 158 aaKnown RBP eCLIP7.48□□□□□ -1.21
VAMP3-201ENST00000054666 PITPNAQ00169 270 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 ALKBH1Q13686 389 aaKnown RBP7.48□□□□□ -1.21
VAMP3-201ENST00000054666 MFSD13AQ14CX5 517 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 MAMSTRQ6ZN01 415 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 PRR23CQ6ZRP0 262 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 PM20D2Q8IYS1 436 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 OR6V1Q8N148 313 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF248Q8NDW4 579 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 OR5AK2Q8NH90 309 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 UBASH3BQ8TF42 649 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 EDAQ92838 391 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 PTDSS2Q9BVG9 487 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 GAREM1Q9H706 876 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 NOX4Q9NPH5 578 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 DDX28Q9NUL7 540 aaKnown RBP7.48□□□□□ -1.21
VAMP3-201ENST00000054666 KLRF1Q9NZS2 232 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 FKBP7Q9Y680 259 aa7.48□□□□□ -1.21
VAMP3-201ENST00000054666 LY6G6EA0A0G2JKS1 128 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 PRSS37A4D1T9 235 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ACOD1A6NK06 481 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 LAMTOR5O43504 91 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 NPIPB7O75200 414 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 TMEM127O75204 238 aa7.47□□□□□ -1.21
VAMP3-201ENST00000054666 ZNF432O94892 652 aa7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms