RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 C1QL3Q5VWW1 255 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 GPALPP1Q8IXQ4 340 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 CMTM4Q8IZR5 234 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 ZSCAN1Q8NBB4 408 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 NPEPL1Q8NDH3 523 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 DDOQ99489 341 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 DLL4Q9NR61 685 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 CUTCQ9NTM9 273 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 RNF215Q9Y6U7 377 aa11.96□□□□□ -0.49
CTNS-201ENST00000046640 POM121CA8CG34 1229 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 METTL12A8MUP2 240 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 PRR32B1ATL7 298 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 SPI1P17947 270 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 ZP1P60852 638 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 TSPAN5P62079 268 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 BDH1Q02338 343 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 OC90Q02509 493 aaPredicted RBP11.96□□□□□ -0.5
CTNS-201ENST00000046640 KLHL26Q53HC5 615 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 CD276Q5ZPR3 534 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 DMKNQ6E0U4 476 aaPredicted RBP11.96□□□□□ -0.5
CTNS-201ENST00000046640 C16orf47Q6ZP98 133 aaPredicted RBP11.96□□□□□ -0.5
CTNS-201ENST00000046640 OR2T4Q8NH00 348 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 NXPE2Q96DL1 559 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 KTI12Q96EK9 354 aaPredicted RBP11.96□□□□□ -0.5
CTNS-201ENST00000046640 OR2M2Q96R28 347 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 C20orf85Q9H1P6 137 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 TTYH1Q9H313 450 aaPredicted RBP11.96□□□□□ -0.5
CTNS-201ENST00000046640 NANSQ9NR45 359 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 ST6GALNAC2Q9UJ37 374 aa11.96□□□□□ -0.5
CTNS-201ENST00000046640 ING1Q9UK53 422 aaPredicted RBP11.96□□□□□ -0.5
CTNS-201ENST00000046640 A0A1B0GTH9 108 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 A0A1W2PR77 199 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 DCTN6O00399 190 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 SCDO00767 359 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 ARPC1BO15143 372 aaKnown RBP11.95□□□□□ -0.5
CTNS-201ENST00000046640 MBTPS2O43462 519 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 KHDRBS3O75525 346 aaKnown RBP11.95□□□□□ -0.5
CTNS-201ENST00000046640 OR7A10O76100 309 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 RGS11O94810 467 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 UTS2O95399 124 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 ALDOBP05062 364 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 MST1P26927 711 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 GRK6P43250 576 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 BLVRAP53004 296 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 NRG3P56975 720 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 SLC37A1P57057 533 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 CTXN1P60606 82 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 SIRPAP78324 504 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 IGLV3-21P80748 117 aaPredicted RBP11.95□□□□□ -0.5
CTNS-201ENST00000046640 ZNF782Q6ZMW2 699 aaPredicted RBP11.95□□□□□ -0.5
CTNS-201ENST00000046640 PMM1Q92871 262 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 KCTD12Q96CX2 325 aaKnown RBP11.95□□□□□ -0.5
CTNS-201ENST00000046640 SEMA4CQ9C0C4 833 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 SERTAD3Q9UJW9 196 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 COL4A2P08572 1712 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 IGHV3-20A0A0C4DH32 117 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 CCDC85CA6NKD9 419 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 C11orf98E9PRG8 122 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 ZNF749O43361 778 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 HCRTR2O43614 444 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 ICOSLGO75144 302 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 UBL3O95164 117 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 SRFP11831 508 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 NR0B1P51843 470 aaKnown RBP11.95□□□□□ -0.5
CTNS-201ENST00000046640 TDGQ13569 410 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 GRM7Q14831 915 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 NSDHLQ15738 373 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 STPG1Q5TH74 334 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 OR5M10Q6IEU7 315 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 FCRLAQ7L513 359 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 NLRC3Q7RTR2 1065 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 MARCH3Q86UD3 253 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 OR52I2Q8NH67 350 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 ADAMTS14Q8WXS8 1223 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 NOX4Q9NPH5 578 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 DIABLOQ9NR28 239 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 LANCL2Q9NS86 450 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 ZNF337Q9Y3M9 751 aa11.95□□□□□ -0.5
CTNS-201ENST00000046640 TLCD2A6NGC4 264 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 EFCAB7A8K855 629 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 ZNF217O75362 1048 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 PLGP00747 810 aaPredicted RBP11.94□□□□□ -0.5
CTNS-201ENST00000046640 TACR3P29371 465 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 RAD52P43351 418 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 SOX2P48431 317 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 GBX2P52951 348 aaPredicted RBP11.94□□□□□ -0.5
CTNS-201ENST00000046640 LTBQ06643 244 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 TPRA1Q86W33 373 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 THAP3Q8WTV1 239 aaPredicted RBP11.94□□□□□ -0.5
CTNS-201ENST00000046640 SLC25A36Q96CQ1 311 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 RBP7Q96R05 134 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 NKX3-1Q99801 234 aaPredicted RBP11.94□□□□□ -0.5
CTNS-201ENST00000046640 UBQLN4Q9NRR5 601 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 INPP5EQ9NRR6 644 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 NCDNQ9UBB6 729 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 ZNF69Q9UC07 566 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 GMEB2Q9UKD1 530 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 BAIAP2Q9UQB8 552 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 TMEM72A0PK05 275 aa11.94□□□□□ -0.5
CTNS-201ENST00000046640 C2orf72A6NCS6 295 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms