RNA–Protein interactions for RNA: ENSMUST00000098548.7

Scn1b-201, Transcript of Sodium channel subunit beta-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Scn1b, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1b-201ENSMUST00000098548 Cnpy1Q4VAB4 94 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Slc22a13Q6A4L0 551 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr645Q7TRQ1 315 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Nup107Q8BH74 926 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr672Q8VG28 312 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr1090Q8VGA6 313 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Sec16bQ91XT4 1051 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Gjc3Q921C1 269 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Dctn2Q99KJ8 402 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Tmem43Q9DBS1 400 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Tor3aQ9ER38 385 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Plod2Q9R0B9 737 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 RfxankQ9Z205 269 aa20.62■□□□□ 0.89
Scn1b-201ENSMUST00000098548 BC035947B2RQY6 695 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 ItpkbB2RXC2 942 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr519K7N645 319 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Gm3755K7N743 167 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Mtnd1P03888 318 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Cd40P27512 289 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Efna1P52793 205 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Fthl17dQ3SXD1 176 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Spag8Q3V0Q6 470 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Irgm1Q60766 409 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Polr2mQ6P6I6 366 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 DgkzQ80UP3 929 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Nmral1Q8K2T1 309 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Thoc3Q8VE80 351 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr1232Q8VEX7 311 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr1020Q8VFK7 317 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Ddit4lQ8VHZ5 193 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Fthl17Q99MX2 176 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Mrpl54Q9CPW3 135 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Q9CQF4 240 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Wwp2Q9DBH0 870 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Plxdc2Q9DC11 530 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Sacm1lQ9EP69 587 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Dap3Q9ER88 391 aaKnown RBP20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Nectin3Q9JLB9 549 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr2Q9QWU6 327 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Tpk1Q9R0M5 243 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Dock10Q8BZN6 2150 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Arhgap21Q6DFV3 1944 aa20.61■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Rhox2bA2A447 191 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Fam71dD3YV92 440 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Gm21319F6YNI8 144 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Vmn1r167G3UW71 315 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Emc8O70378 207 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 RradO88667 308 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Zfp28P10078 825 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Klf16P58334 251 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Pitx2P97474 317 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Scn1bP97952 218 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 RykQ01887 594 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Tle3Q08122 772 aaKnown RBP20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 BC030870Q3V2G4 71 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 C130050O18RikQ497Y9 356 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Shc4Q6S5L9 626 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Spag1Q80ZX8 901 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 March11Q8CBH7 400 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 St7lQ8K4P7 559 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr1423Q8VFV0 310 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 SostQ99P68 211 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Aaed1Q9D1A0 226 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Med8Q9D7W5 268 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Slco1a1Q9QXZ6 670 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr545Q9WU94 316 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 HaspinQ9Z0R0 754 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Dctn3Q9Z0Y1 186 aa20.6■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Gm7145A0A087WS64 360 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Gm17949A0A1B0GRV7 212 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 A0A286YD17 136 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Gm14085A2AWR5 660 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr740E9PV79 311 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Zfp54E9PW05 585 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 S100a2J3QMC7 104 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 CyctP00015 105 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 P01634 136 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Klrb1cP27814 223 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Vipr2P41588 437 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Klhl21Q3U410 597 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Parp8Q3UD82 852 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Tbc1d24Q3UUG6 561 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr3Q60879 313 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Abcg1Q64343 666 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Q80UB0 333 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 A730049H05RikQ8C940 139 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Tab1Q8CF89 502 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Zdhhc1Q8R0N9 484 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Mrgpra1Q91WW5 304 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Spcs2Q9CYN2 226 aaKnown RBP20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Prr12E9PYL2 2035 aaKnown RBP20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Cabin1G3X8Q1 2187 aaKnown RBP20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 CenpeQ6RT24 2474 aaKnown RBP20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Vps13cQ8BX70 3748 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Trbv20A0A0B4J1H5 111 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Gm4787B2RUD9 748 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Olfr730E9Q8M3 318 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Pcdh1F7BJK1 1077 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Prps1l3G3UXL2 318 aa20.59■□□□□ 0.89
Scn1b-201ENSMUST00000098548 Bbip1J3QMK2 67 aa20.59■□□□□ 0.89
Retrieved 100 of 22,080 RNA–protein pairs in 49.3 ms