RNA–Protein interactions for RNA: ENSMUST00000023147.6

Ciita-201, Transcript of MHC class II transactivator, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ciita, Length 5,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ciita-201ENSMUST00000023147 CtnsP57757 367 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Snrpd2P62317 118 aaKnown RBP10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Elavl2Q60899 360 aaKnown RBP10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Olfr1196Q7TR14 314 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Zar1Q80SU3 361 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Vangl1Q80Z96 526 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Agfg1Q8K2K6 561 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Hyal1Q91ZJ9 462 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Rbm7Q9CQT2 265 aaKnown RBP10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Tgm1Q9JLF6 815 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 SrrQ9QZX7 339 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Bcl3Q9Z2F6 448 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Zfp534A2A7A1 661 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Prdm13E9PZZ1 754 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 HgdO09173 445 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Pip5k1cO70161 661 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Hdac3O88895 424 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Eef1a1P10126 462 aaKnown RBP10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Rpl13aP19253 203 aaKnown RBP10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Mmp2P33434 662 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Rab5cP35278 216 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Olfr629Q0VBH3 314 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Gm10696Q3UTC4 357 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Olfr859Q7TRF5 309 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 GalpQ810H5 117 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Tmem163Q8C996 288 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Slc49a3Q8CE47 516 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Il34Q8R1R4 235 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 RtcAQ9D7H3 366 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Csnk1dQ9DC28 415 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 4930563M21RikA0A1L1SUT5 578 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Wfdc16A2A5H4 111 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Skint2A7XUX6 400 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 BC049352E9Q2Z6 85 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Maml2F6U238 1170 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 5730507C01RikJ3QPX0 416 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Phlda2O08969 144 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Tcn2O88968 430 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 P20040 264 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Pitx1P70314 315 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Ctu2Q3U308 514 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Ranbp10Q6VN19 620 aaKnown RBP10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Olfr598Q7TRR2 319 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Ncr1Q8C567 325 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Vmn1r18Q8R2C8 299 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Olfr676Q8VGZ9 317 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 EpcamQ99JW5 315 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Cby1Q9D1C2 127 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Hapln2Q9ESM3 341 aa10.11□□□□□ -0.79
Ciita-201ENSMUST00000023147 Olfr1025-ps1A0A140T8K3 312 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Cd300ld4A2A7W1 245 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Zfp937A2ANU7 503 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Gm15056F6ZR08 88 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Zfp141G3UY09 685 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Zfp994J3QM38 661 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Prrt1O35449 306 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Chrm4P32211 479 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 RetP35546 1115 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Tmem14aP56983 99 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 MybphP70402 483 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Rhox4dQ2MDG0 205 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Dmrtc1bQ2PMX6 267 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Mfsd2bQ3T9M1 494 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Rhox4eQ504P9 205 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 CrhbpQ60571 322 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Gpr17Q6NS65 339 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Mfsd4aQ6PDC8 510 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Cd300ld3Q6SJQ5 245 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Olfr1283Q7TQY4 305 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Plekho2Q8K124 495 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Vmn1r192Q8K4C9 300 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Cuedc1Q8R3V6 388 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Olfr1461Q8VEV7 312 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Olfr1277Q8VF41 303 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Olfr339Q8VGK8 309 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Mpped2Q9CZJ0 294 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Rhox4bQ9JI43 205 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Nrip3Q9JJR9 240 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Urb1Q571H0 2274 aaKnown RBP10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 2610044O15Rik8A0A087WRJ1 410 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Cytl1A1E5L0 139 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Vmn2r80E9Q1L0 863 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Il13P20109 131 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Tacr3P47937 452 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 P58686 83 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Zdhhc2P59267 366 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Ube2g2P60605 165 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Cd80Q00609 306 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 PfplQ5RKV8 702 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Rpl35Q6ZWV7 123 aaKnown RBP10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Zadh2Q8BGC4 377 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Znf689Q8BKK5 500 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Exosc6Q8BTW3 273 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Nfatc4Q8K120 901 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Dlk2Q8K1E3 382 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Nectin4Q8R007 508 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Sec14l4Q8R0F9 403 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Or51e2Q8VBV9 320 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Olfr1163Q8VFR4 316 aa10.1□□□□□ -0.79
Ciita-201ENSMUST00000023147 Olfr1263Q8VG63 306 aa10.1□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 41 ms