RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Gch1Q05915 241 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Hectd3Q3U487 861 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Gm136Q3V037 328 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 P4ha2Q60716 537 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 IfnkQ7TSL0 199 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Cldn34b3Q80ZS5 209 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Eipr1Q8K0G5 386 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr97Q8VFE1 310 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr120Q8VFQ2 330 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 4930503E14RikQ9D583 177 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 FtmtQ9D5H4 237 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Sh3bgrlQ9JJU8 114 aaKnown RBP15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Bmp10Q9R229 421 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 RlimQ9WTV7 600 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Igkv12-38A0A0G2JEI7 115 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Cx3cl1O35188 395 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Sult2a2P50236 285 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Kcnn3P58391 732 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Tmprss9P69525 1065 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Lingo2Q3URE9 606 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 St6gal1Q64685 403 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr1349Q7TQV1 317 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr374Q7TRY0 313 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Kbtbd11Q8BNW9 633 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Rspry1Q8BVR6 576 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Peli1Q8C669 418 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Tctn3Q8R2Q6 595 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Rhbdl1Q8VC82 373 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Cldnd1Q9CQX5 253 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Ceacam20Q9D2Z1 577 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Gpn3Q9D3W4 284 aa15.09■□□□□ 0.01
Shh-201ENSMUST00000002708 Olfr634-ps1A0A1B0GRN7 318 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 A0A1L1STL9 112 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 Vmn1r57K7N731 310 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 EomesO54839 707 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 FaslgP41047 279 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 Mmp7Q10738 264 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 Mfsd12Q3U481 476 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 Pla2g7Q60963 440 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 Mospd3Q8BGG6 235 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 Slc36a2Q8BHK3 478 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 Znf775Q8BI73 538 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 Zfand2bQ91X58 257 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 Q9CQF4 240 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 Fzd5Q9EQD0 585 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 RhouQ9EQT3 261 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 Cnot9Q9JKY0 299 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 MeltfQ9R0R1 738 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 Minpp1Q9Z2L6 481 aa15.08■□□□□ 0.01
Shh-201ENSMUST00000002708 6430628N08RikA0A0U1RQ45 177 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 SelenonD3Z2R5 557 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 Hnrnpa2b1O88569 353 aaKnown RBP15.08■□□□□ 0
Shh-201ENSMUST00000002708 Sod2P09671 222 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 Ca10P61215 328 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 Ap2s1P62743 142 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 2410002F23RikQ3TE80 284 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 BpiQ67E05 483 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 Alkbh2Q6P6J4 239 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 Scgb1c1Q7M742 95 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 Gadl1Q80WP8 550 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 Nupl2Q8CIC2 420 aaKnown RBP15.08■□□□□ 0
Shh-201ENSMUST00000002708 SrrdQ8K2M3 249 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 Itfg2Q91WI7 443 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 Trappc2Q9CQP2 140 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 Exosc5Q9CRA8 235 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 Dbf4Q9QZ41 663 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 NfkbiaQ9Z1E3 314 aa15.08■□□□□ 0
Shh-201ENSMUST00000002708 4932443I19RikA0A286YE38 169 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Stpg3A2RSX4 306 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Morn1A2RTS7 477 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Gm572B1ARY8 399 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Vmn2r99H3BK37 856 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Ms4a18J3QN01 344 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 2410141K09RikK7N769 464 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Angpt1O08538 498 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Pmm1O35621 262 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Dsg2O55111 1122 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Klk1b9P15949 261 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Fcgr1P26151 404 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Rps11P62281 158 aaKnown RBP15.07■□□□□ 0
Shh-201ENSMUST00000002708 Tgif1P70284 272 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Snai2P97469 269 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Olfr1428Q0VDY1 314 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Dus4lQ32M08 324 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Flrt3Q8BGT1 649 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Endod1Q8C522 501 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Kctd20Q8CDD8 419 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Trmt6Q8CE96 497 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Slc43a2Q8CGA3 568 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 RfesdQ8K2P6 157 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Sec14l4Q8R0F9 403 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Mboat2Q8R3I2 519 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 AplfQ9D842 499 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Jam3Q9D8B7 310 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Tmem176bQ9R1Q6 263 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Gm21854A0A087WNM4 232 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Gm45062E0CZ38 131 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Olfr420E9Q4G0 321 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 LipiF6YQT7 476 aa15.07■□□□□ 0
Shh-201ENSMUST00000002708 Alx4O35137 399 aa15.07■□□□□ 0
Retrieved 100 of 22,080 RNA–protein pairs in 35.4 ms